Desulfurivibrio alkaliphilus: DaAHT2_1414
Help
Entry
DaAHT2_1414 CDS
T01244
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DaAHT2_1414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dak03019
]
DaAHT2_1414
03009 Ribosome biogenesis [BR:
dak03009
]
DaAHT2_1414
Enzymes [BR:
dak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DaAHT2_1414
Messenger RNA biogenesis [BR:
dak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DaAHT2_1414
Ribosome biogenesis [BR:
dak03009
]
Prokaryotic type
rRNA helicases
DaAHT2_1414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
ADH86109
UniProt:
D6Z3I4
LinkDB
All DBs
Position
1671661..1673499
Genome browser
AA seq
612 aa
AA seq
DB search
MTDSDILTDILSFSQLPLAPAIHRAVDELGFETPTPIQAESIPPLLAGRDLLGQAQTGTG
KTAAFSLPLLSQLEVDKKYPQLLVLAPTRELALQVAEAMQSFARHLPGFQVLPLYGGQNM
TLQLRRLQRGAQVVVGTPGRIQDHLRRGTLRLERLSAVVVDEADEMLKMGFIDAVEQILE
HAPKERQVALFSATMPTAVRKIAHRHLKNPVEIKIKRTTTSMAAITQQFWAVKGLHKLDA
LTRLLEAEEFEAVLVFVRTKVATVELAEKLEARGFAAAALNGDMTQQMREKTIEQVKSGA
LDIVVATDVAARGLDVARITHVINYDVPYDTESYIHRIGRTGRAGRQGKAIIFVTPRERR
LLAAIEQASGQKIAPISLPSRQDISDRRVSLFKEKISEVMAQQELDFFEELIDDYQQEQD
VDPRRIAAALSWLLQQERPLQAPAEPEGRASSREDDSALAGGGKKWEREPQRREHSRERD
QERQHDRSHDQWRRYRIEVGRQHGVEPGNIVGAITNEANLSSREIGAIKIYDFFSLVDLP
HDLPQPLVRHLEKVWIRSRQLYLRPDGEPLPEGAKAKAGPSGRAGKPPRPRTGVRRYPRT
NRSEPRKGGKRR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcggacattctcacggatattcttagtttctcccagttgcccctggcgccg
gccattcaccgggcggtggatgagcttggctttgaaacccccactcccattcaggccgaa
agcattccgccgctgctggccgggcgcgatctgctggggcaggcccagaccggcaccggc
aagaccgccgccttctccctgcccctgctcagccaactggaggtcgacaaaaaatatccc
caactgctggtgttggcccccacccgggagctggccctgcaggtggccgaggccatgcag
agcttcgcccgccacctgcccggcttccaggtgctgccgctgtacggcggccagaacatg
accctgcagttgcgccgcctgcaacgcggcgcccaggtggtggtgggcaccccgggtcgt
atccaggaccacctgcgccggggcaccctgaggctggagcggctcagcgcggtggtggtg
gacgaggccgacgagatgctcaagatgggcttcatcgacgccgtggaacagatcttggag
cacgcccccaaggagcgccaggtggcgctcttctccgccaccatgccgacggcggtgcgc
aagatcgcccaccggcatttgaaaaacccggtggagatcaaaatcaagcgcaccaccacc
agtatggccgccatcacccagcagttctgggcggtcaagggtttgcacaagctggacgcc
ttgacccgcctgctggaagccgaggagttcgaggcggtgctggtctttgtccgcactaag
gtggccaccgtggaactggccgagaagctggaggcccggggctttgccgccgccgcctta
aacggcgacatgacccagcagatgcgggaaaagaccatcgaacaggttaaaagcggcgcc
ctggatatcgtggtggccaccgacgtggccgcccggggcctggatgtggcgcggatcacc
cacgtgatcaactacgatgtgccctacgacaccgaatcgtacatccaccgcatcggccgc
accggccgggccgggcggcagggcaaggcgatcatcttcgttaccccgcgggagcggcgg
ctgctggcggccatcgagcaggccagcggccagaagatcgcccccatcagcctgcccagc
cgccaggatatcagcgaccggcgggtcagcctcttcaaggaaaagatcagcgaggtaatg
gcccagcaggaactggatttttttgaagagttgatcgacgactaccagcaggagcaagac
gtcgacccccggcggatcgccgccgccttaagctggctgctccagcaggagcgccccctg
caggccccggccgaaccggagggccgagcgtcatcccgggaagacgattccgccttggcc
ggcggcggcaaaaaatgggaacgggagccgcagcgccgtgagcattcccgggaacgggac
caagagcgccagcacgaccggagtcatgatcagtggcggcgctaccgcattgaagttggc
cgccagcacggagtggagccgggcaacatcgtcggggccatcaccaacgaggccaacctc
agcagtcgcgagatcggcgccatcaagatttacgattttttcagcctggtcgatttgccc
cacgatctgccccagcctctggtgcggcacctggaaaaggtctggattcgcagccgccag
ctctacctgcgccccgacggcgagcctctgcccgagggcgccaaggcaaaggccggcccc
agtggccgggcgggcaaaccgccacggccccgcaccggagtccgccgctacccccgcacc
aatcgcagcgaaccgcgcaaaggcggcaaacgccgctga
DBGET
integrated database retrieval system
