Desulfurivibrio alkaliphilus: DaAHT2_1425
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Entry
DaAHT2_1425 CDS
T01244
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DaAHT2_1425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dak03021
]
DaAHT2_1425
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1425
Enzymes [BR:
dak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DaAHT2_1425
Transcription machinery [BR:
dak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DaAHT2_1425
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DaAHT2_1425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Spectrin_7
Ig_NUP210_14th
F_actin_cap_B
Motif
Other DBs
NCBI-ProteinID:
ADH86120
UniProt:
D6Z3J5
LinkDB
All DBs
Position
complement(1683083..1684108)
Genome browser
AA seq
341 aa
AA seq
DB search
MTKENDTFYRNWHDLIFPEKLEVDQDTHTASFGKFICQPLERGFATTIGNSLRRILLSSI
RGAAITSVKIEGVLHELSTIPGIKEDATEIILNLKEVRLRLHSGEAKTVRIEKKKKGVVT
AGDIIGDPQVEVMNPEQHICTITGDGKFDAELEVDWGKGYVPAERNKREDQPIGVIPLDS
VFTPIRNVRVITSQARVGQQTDYDKLTLEITTDGSILPEDALAYAAKILKEQMQVFINFD
ESAVVPVKKEKESGEQPQLNENLYRSVEDLELSVRSANCLRNAEIRHIGELVQKTEAEML
KTKNFGRKSLNEIKQLLSEMDLYLGMKIDGWEPPADEPEEE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagagaacgatacattttatcgcaactggcatgacctgatttttccggaaaag
cttgaggttgaccaggatacccatactgcaagcttcggaaaatttatctgtcagccgctg
gagcgtggctttgccaccaccatcggcaactccctgcggcggattctgctgtcgtccatt
cgtggggcggccattacctcggtgaaaattgagggggtgctgcatgaactctccaccatc
ccggggatcaaggaagacgccaccgagattattctgaacctaaaagaagtgcgcctgcgc
ctgcactccggcgaggccaaaacggttcggattgagaagaagaaaaaaggggtggtaacc
gccggcgacattattggcgatcctcaggttgaggtaatgaaccccgaacagcatatctgc
accatcaccggagacggcaagtttgatgccgaactggaagttgactggggcaagggttat
gtgccggcggagcgcaacaagcgtgaagatcagcccattggcgtgattcccctggattcc
gtctttacccccatccgcaacgttagggtaatcaccagtcaggcccgggtcggtcagcag
accgactacgacaagcttaccctggagattaccaccgacggcagcatcctgcccgaggat
gccttggcctatgccgccaagattctcaaggagcagatgcaggtcttcatcaacttcgat
gagagtgccgtggtaccggtgaaaaaggagaaagagagcggcgagcagccccagctcaac
gagaatctataccgcagcgtagaggatctggagctttcggtacgctcggccaactgtttg
cgtaacgccgagattcgccatatcggcgagctggtgcaaaagaccgaggccgagatgctg
aaaaccaagaacttcggccgtaagtctttaaacgagatcaagcaactgctctccgagatg
gatctctacctgggtatgaagatcgatggctgggaaccgccagctgatgagcctgaagaa
gagtaa
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