Desulfurivibrio alkaliphilus: DaAHT2_1459
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Entry
DaAHT2_1459 CDS
T01244
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DaAHT2_1459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dak03021
]
DaAHT2_1459
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1459
Enzymes [BR:
dak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DaAHT2_1459
Transcription machinery [BR:
dak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DaAHT2_1459
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DaAHT2_1459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ADH86154
UniProt:
D6Z3M9
LinkDB
All DBs
Position
complement(1706891..1711012)
Genome browser
AA seq
1373 aa
AA seq
DB search
MQMTRRIRKNFAKTRAIVEKPHLIEMQSRSYEKFLQMETPPDQRLDEGLQGIFKSVFPIK
DFKDACSLEFVNYTFGEPKYTVEECIQRGLTFEVPVKMTVRLVTYDTDPDSGAQSIRDIK
EQSVYLGSIPLMTKAGVFVINGTERVIVSQLQRSPGLFYTHDGGKTHAGGKLLYSARIIP
VRGSWVDLEFDAKDILYVRIDRRRKFPVTTLLKTLGYGSEDLLRYFYQIESVSIEEGKLK
KGFDPETMVGQRLPHDLISPADGEVLARKGRKVGKALARKIADAGITGLEIEAADLVGKV
TASPVVNPETGEIMIPVNTELSETMLEEISAAGVKNFDILLIDGIKVSDSFRKTLALDRV
ESREDALIEIYRRLRPSSPPTLEVAESFFNNLFFSPELYDLSVVGRFKLNARLGIDTDIN
IRTLTVEDIMLAVLHLVRLKDSQGPIDDIDHLGNRRVRTVGELVENQYRMGLVRMERAIK
ERMSLQEVESLMPHDLINPKPITAAIKEFFGTSQLSQFMDQTNPLSEVTHKRRLSALGPG
GLSRERAGFEVRDVHPTHYGRICPVETPEGPNIGLIVSLASYARVNEYGFIETPYRKVEN
RKVSNQIEYMTALDEEDQVIAPARSETDGKGKLVDGPLIARQAGEVMISIADEVTYMDVS
PNQLVSVGASLVPFLENDDANRALMGSNMQRQGVPLLRSEAPLVGTGLESAVAQDSGVCL
LAGGDGVVEEVDANRIVVRYDEPGTDGFTTGIGIYRLEKYKKSNQNTCFTQRPLVEPGVR
VKKGDILADGPACDHGELALAKNVTVAFMPWRGYNYEDSILVNERLLKNDTYTSFHIEVF
ETVARDTKLGKEEVTRDIPNVSEEALRNLDESGIVRVGAEIKAGDILVGKITPKGETQLS
PEEKLLRAIFGEKAGDVKDTSLRVPPGVEGVVVDAKVFSRKGVEKDERSLAIEEAEIKAL
ERDLEDELNLLARSVRNGLADLLVGKKVKNAVKNRKGEELLAKDKKITREVLEKLSPSEI
KKLDYAGRDSLEGEINLLFDRHDSQVKMVRSRYEARIARLQKGDDLPPGVIRMVKVYLAI
KRKLAVGDKMAGRHGNKGVVSRILPEEDMPYFADGTAVDIVLNPLGVPSRMNVGQLLEIH
LGLAAKKLGEQVQRLAQTRDLAAVKKKLAAVYSKEEYEQLLADLTDDDLLELASRMGKGL
HMATPVFDGAQEEEIRRLLVEAGLDEIGQLDLYDGLTGEKFDNQVTVGSMYMLKLHHLVD
DKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYTLQEFLTVKSDDVGG
RTKMYERIVKGNNFLEAGLPESFHVLVKELQGLCLDMELLDELPPVRENEKEQ
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgaccagacgaatccgcaagaactttgccaaaaccagggcgatagttgagaaa
ccgcatcttatcgagatgcagagccgttcctacgaaaagtttctgcagatggaaactcct
ccggaccagcgccttgatgaagggctgcaggggatcttcaagagtgtgttccccatcaag
gacttcaaggatgcctgttccctggaatttgtcaactacacttttggtgagcccaagtac
accgttgaggagtgtatccagcgggggctgaccttcgaagtgccggtcaagatgacggta
cgtctggtcacctatgacaccgatcctgacagcggggcccagagcatccgtgatattaag
gagcagtcggtttacctgggcagtattccgctgatgaccaaggccggggtgtttgtaatc
aacggcaccgagcgggttattgtcagccagctgcagcgctcgccgggccttttctatacc
catgacgggggcaagacccatgccggcggcaagctgttgtactccgcccgtattatcccg
gtgcgcggctcctgggtggacctggagtttgacgccaaagatattctttatgtccgtatc
gaccgccgccgcaagttcccggtcaccactctgctcaagaccttaggctacggcagcgaa
gatctgctgcgctatttctaccagatcgaatcggtcagtattgaagaaggcaagctgaaa
aagggctttgaccctgaaaccatggtgggccagcgtctgccccacgacctgatcagcccc
gccgatggcgaagtgctggctcgcaagggccgcaaggtgggtaaggctttggcgcgcaag
attgccgatgccgggattaccggcctggagattgaggccgccgacctggtgggcaaggtt
accgccagcccggtggttaaccccgagaccggcgagatcatgatcccggttaataccgaa
ctcagcgaaaccatgctggaggaaattagtgccgccggggttaaaaactttgatattttg
ctgatcgacggcatcaaggtcagcgactcgttccgcaaaaccctggccctggaccgggtg
gagagccgggaagacgcgttgatcgaaatttatcgccgcttgcgccccagcagcccgccg
accctggaagtggcggaaagcttttttaacaatctctttttcagcccggaactttacgat
ctctcggtggtggggcgcttcaaattgaatgcccgcctggggatcgataccgatatcaat
attcgtaccctgaccgtggaggatatcatgctggcggtgctgcacctggtgcggctcaag
gacagccagggccccatcgatgatatcgatcatctgggcaaccgtcgggtgcgtacggtg
ggcgaactggtggaaaaccagtaccgcatggggctggtgcgcatggagcgggccatcaag
gagcggatgagcctccaggaggtggaaagcctgatgccccacgacctgatcaaccccaag
ccgattaccgcggcgatcaaggagtttttcgggaccagccagctctcccagttcatggat
cagaccaaccccctgtcggaagtcacccacaagcggcgcttgagtgccctgggacccggt
ggtctttcccgggagcgggccggcttcgaggtgcgcgatgtgcatcccacccattatggt
cggatctgcccggttgagaccccggaaggccccaacatcggcctgatcgtctcgttggcc
tcttatgcccgggtcaatgagtacggtttcattgaaaccccttaccgcaaggtggaaaac
cgcaaggtcagcaaccagatcgaatacatgaccgcgcttgacgaggaagatcaggtcatc
gccccggctcgcagcgagaccgacggcaagggtaagctggttgacgggccgctgattgcc
cgccaggccggcgaggtaatgatcagcatcgccgacgaagtaacctacatggacgtctct
cccaatcagctggtgagcgttggggcctcgctggttcctttcctggaaaacgacgacgcc
aaccgggccctgatgggttccaacatgcaacgccagggtgtgcccttgttgcgttccgag
gctcccctggtgggaaccgggctggaaagcgcggtggcccaggactccggggtttgtctg
ctggccggcggcgacggggtggtggaagaggtggacgccaaccgcatcgtggtccgctac
gatgagccgggcaccgatggttttaccaccggcatcggcatctatcggctggaaaagtac
aagaagtccaaccagaatacctgctttacccagcggccgctggtggagcccggtgtgcgg
gtgaaaaagggtgatatcctggccgacggtccggcctgcgatcatggtgagctggccctg
gccaagaatgtcaccgtggccttcatgccctggcgcggctataactacgaagactctatt
ctggttaacgaacggctgctgaaaaatgacacctatacctctttccatatcgaagttttt
gaaaccgtggcccgggataccaagctgggcaaggaagaggtgacccgggatattcccaac
gtcagcgaggaggccctgcgcaacctcgatgaatcggggatcgtgcgggtcggggcggag
atcaaggccggcgatatcctggtgggcaagatcacccccaagggggaaacccagctgtcg
ccggaagagaaactgctgcgggccattttcggcgaaaaggccggcgatgtaaaagatacc
tcgttgcgcgtaccccccggcgtcgaaggggtggtggtggatgccaaggtattctcccgt
aaaggggtggagaaggatgaacgcagcttggccattgaagaggccgagatcaaggcgctg
gagcgcgaccttgaggatgaactcaacctgctggcccggagtgtacgcaacggcctggcc
gacctgctggtgggcaagaaggtcaaaaatgcggtgaagaatcgcaagggcgaagagctg
ctggccaaagacaaaaaaatcacccgggaagtgctggagaaactgagcccgtcggaaatc
aagaaacttgactacgccggccgggacagcctggaaggggaaatcaacctccttttcgat
cgtcacgacagccaggtgaagatggtccgcagccgttacgaggcccgtattgcccggctg
cagaagggtgatgatctgccccccggggtgatcaggatggtcaaggtttacttggccatc
aagcgcaaactggcggtgggcgacaagatggctggtcgccacggcaacaaaggtgtggtc
tcgcggattttaccggaagaggacatgccctactttgccgacggcacggcggttgacatc
gtgctcaacccgctgggcgtgccttcgcggatgaacgtgggacagttgctggagattcac
ctggggctggccgccaagaaactcggtgagcaggtccagcgcctggcccagacccgtgat
cttgcggcggtcaagaagaagctggcggcggtgtacagcaaagaggaatatgagcaactg
ctggccgacctgactgatgatgatctgctggaactggcctcccgcatgggcaaagggctg
catatggccaccccggtgttcgacggggcccaggaggaagagatccggcgtctgctggtg
gaggcgggcctggacgagatcggccagctcgatctttacgacggcctgaccggcgagaag
ttcgacaaccaggtcaccgtcgggtccatgtatatgttgaagctgcaccatctggtggac
gacaaaatccacgctcgctccaccggtccctactcgctggtcactcagcagcccctgggc
ggtaaggcccagttcggcggccagcggctgggtgagatggaagtctgggccatggaggcc
tacggggcggcttacaccctgcaggagttcctcaccgtcaagtccgacgacgtgggtggc
cggaccaagatgtatgagcgcatcgtcaaaggcaacaacttcctggaggcgggattgccc
gaatccttccacgtactggtcaaggaactgcaggggctctgcctggacatggagttgctg
gatgagctgccgccggtccgagaaaacgaaaaagagcagtaa
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