Desulfurivibrio alkaliphilus: DaAHT2_1500
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Entry
DaAHT2_1500 CDS
T01244
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DaAHT2_1500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1500
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DaAHT2_1500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DaAHT2_1500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
nSTAND_NTPase5
Microtub_bd
CENPH
DUF87
DUF7623
Motif
Other DBs
NCBI-ProteinID:
ADH86195
UniProt:
D6Z3S0
LinkDB
All DBs
Position
1757529..1759541
Genome browser
AA seq
670 aa
AA seq
DB search
MTEANPFALITEFTPAGDQPRAIELLSRGVNQGATHQVLLGVTGSGKTFTMAQVIAETGR
PALILAPNKTLAAQLYSEFKELFPHNAVEYFVSYYDYYQPEAYIPQSDTYIEKDSAINDT
IDKMRHGATRALLTRRDVIIVASVSCIYGLGSPEEYLNMHLALKVGEDYPPVEIQRRLVH
MLYERNDYSFHRGTFRVRGDVIEIFPVHEEEQALRVELFGDTIEAIRVVDPLRGVVHAEQ
DEATVFPGSHFVTSRERQQQAVKTIKAELKERLRELESAGRLLEAQRLEQRTNFDLEMLA
ELGYCHGIENYSRHFTGRPPGAPPPTLLDYFPDDYLLLVDESHVSIPQVRGMYRGDRSRK
ETLVEYGFRLPSALDNRPLMFDEFAARTNQAIYVSATPGDYELEMAQGRVVEQIIRPTGL
MDPAIEVRPASGQVDDLLAEIRHRAERNEAVLVTTLTKRMAEDLCEYYANLGVRVRYLHA
DIKTLERMELLRDLRRREYDVLVGINLLREGLDLPEVSLVAVLDADKEGFLRSERSLIQT
CGRAARNADGLVILYGDQLSEAMARTIAETNRRRAIQAEYNREHGITPATIRSRIKDIMA
SIYEQDYATVEVPEQAVAEEQPVFRSRDELRKEIRQLEKAMQEAARELAFEDAAELRDRI
KVLKEQELNW
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccaatccttttgccctgatcaccgaatttacccccgccggcgaccaaccg
agagccatcgagcttttaagccggggggtcaaccagggagcgacccaccaggtgctgctg
ggggttaccggctcgggcaagacctttaccatggcccaggtgatcgccgaaaccgggcgc
ccggcgctgattctggcccccaacaagaccctggcggcccagctctactccgagttcaaa
gagcttttcccccataacgcggtggagtattttgtcagctattacgactattaccagccg
gaggcctatattccccagagcgatacctatatcgagaaagactcggccatcaacgacacc
atcgacaagatgcgccacggcgccacccgggccctgctcacccgccgggacgtgatcatc
gtggcctcggtctcctgtatttacggcctgggctcgccggaggaatacctgaacatgcac
ctggccctcaaggtcggcgaggattacccgccggtggaaatccagcgccgcctggtgcat
atgctttacgaacgcaacgactactcctttcatcgcggcaccttccgggtccggggcgat
gtgatcgagatcttcccggtgcatgaagaagaacaggccctgcgggtggagctgttcggc
gacaccatcgaggctatccgggtggtggaccccctgcgcggggtggtccatgccgaacag
gacgaagccacggtctttcccggcagccactttgtcacctcccgggagcgccagcagcag
gccgttaagaccattaaggccgagctgaaggagcgcctgcgggagttggaaagtgccggc
cgcctgctggaggcccagcgcctggaacagcgcaccaacttcgacctggaaatgctggcc
gagttgggctactgccacggcattgaaaactacagccgccatttcaccggccgcccgccc
ggcgcgcccccccccaccctgctggactatttccccgatgactacctgctgctggtggat
gaatcccacgtcagcatcccccaggtgcggggaatgtaccggggagatcgctcccgcaag
gaaaccctggtggagtacggctttcgcctcccttccgccctggacaaccgcccgctgatg
ttcgacgaattcgccgcccggaccaaccaggccatctacgtctccgccacccccggcgac
tatgagttggagatggcccagggacgggtggtggagcagatcatccgccccaccgggttg
atggacccggccatcgaggtacgcccggcctccggccaggtggacgacctgttggcggaa
atccgccaccgggccgagcggaacgaggcggtcctggtgaccacgctgaccaagcggatg
gccgaggatctgtgcgaatactacgccaatctcggggtccgggtccgctatctccatgcc
gacatcaagaccctggagcggatggaactgctccgcgatctacgccgccgcgagtatgac
gtgctggtggggatcaacctgctgcgggaggggctggacctgccggaggtctctctggtg
gcggtgctggacgccgacaaggaggggttcctgcgcagcgaacgctccctgatccagacc
tgcggtcgggccgcccgcaacgccgatggcctggtaatcctctacggcgaccagctcagc
gaggccatggcccgcaccatcgccgaaaccaatcggcggcgggccatccaggcggagtac
aaccgggagcacggcatcacccccgccaccatccgctcgcggatcaaggacatcatggcc
agcatctatgaacaggattacgccaccgtggaggtgccggaacaggctgtcgccgaggag
cagccggtgttccgcagccgagatgagttgcgcaaggagatccggcaattggaaaaggcc
atgcaggaagcggccagggaattggccttcgaggatgccgccgaattgcgggatcgcatc
aaggtcctgaaagagcaagaacttaactggtag
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