Desulfurivibrio alkaliphilus: DaAHT2_1541
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Entry
DaAHT2_1541 CDS
T01244
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
dak
Desulfurivibrio alkaliphilus
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dak03032
]
DaAHT2_1541
03036 Chromosome and associated proteins [BR:
dak03036
]
DaAHT2_1541
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_1541
DNA replication proteins [BR:
dak03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DaAHT2_1541
Chromosome and associated proteins [BR:
dak03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DaAHT2_1541
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DaAHT2_1541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
HU-CCDC81_euk_2
YolD
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADH86236
UniProt:
D6Z3W1
LinkDB
All DBs
Position
1812859..1813137
Genome browser
AA seq
92 aa
AA seq
DB search
MLKRDLINAVAEEMPGFLKKDLDQALDIMLENILQALEDNRRVEIRGFGSFSVRERKART
TKNPRTGKVMHIPPRKNVHFTMSKSLKDGLID
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacgggatctcatcaacgccgtcgccgaagaaatgcccggtttcctgaaaaaa
gatctggaccaggccctggacatcatgctggaaaatatcctccaggcactggaggataac
cgccgggtggaaatccggggttttggcagcttctcggtacgcgaacgcaaggcccgcacc
accaaaaaccccagaaccggcaaggtgatgcacatccccccccgcaaaaacgtacacttc
accatgagcaagtctctgaaagacgggctcatcgactga
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