Desulfurivibrio alkaliphilus: DaAHT2_2206
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Entry
DaAHT2_2206 CDS
T01244
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak02020
Two-component system
dak02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DaAHT2_2206
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DaAHT2_2206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dak03021
]
DaAHT2_2206
Transcription machinery [BR:
dak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DaAHT2_2206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
ADH86871
UniProt:
D6Z6A6
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All DBs
Position
complement(2569783..2571279)
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AA seq
498 aa
AA seq
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MALELRQSLKLSQQLVMTPQLQQAIKLLQLSRLELMETVQQELEVNPVLEEGLDLYEDGG
NPADDPLPDSALAGNNGPEEELGRSEPEQTAEISMDSSSALGEIDWGNYLNEYAGDQSDG
GYSGAAGRDDDAPPSRLEIMSVRPSLQSHLQWQLNLSHISDREKEIGEFIIGNLDENGFL
LVSPEEICSQTDCTPAEADHLLSRVQEMDPAGVGAQDLRHCLLLQLARLEAADSLAARIV
RDHLSLLETRNYPGLAKATGASTAEVSAAVEVITGLNPRPGRLYSDADPVYIVPDVYVYK
LGEEYVIMLNDEGLPRLRISNYYRDILDKDSTAPGATKDYVQDKLRSAMWLIKSIQQRQR
TIYRVVESLLKFQRDFFEHGVNKLKPMVLRDVAEDIGMHESTISRVTTNKYVHTPQGTFE
LKYFFNSTISTEAGDGMASESIKQRLKSIVQHEDRKKPLSDSAIAAVFSRDGIRLARRTV
AKYREQLGILPSKLRRRP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggccctggaactgcgacaaagcttgaagttgagccaacaactggtgatgactccccag
ttgcagcaggccatcaagctgttgcagctttcccggctggaactgatggaaaccgtccag
caggaactggaggtcaacccggtgctggaagagggcctggacctgtacgaagatggcggc
aaccccgccgacgacccactgcccgactcggccctggccggcaacaacggcccggaagaa
gagcttggccgcagcgaaccggaacagaccgccgagatcagcatggattcctcctcggcc
ctgggcgagatcgactggggcaactacctcaacgaatacgccggcgaccagagcgacggc
ggttactccggcgccgccggccgggatgatgacgcccccccttcccgcctggagatcatg
agcgttcgcccctccctgcaaagccacctgcagtggcagctcaacctgtcccacatcagc
gaccgggagaaagagatcggcgagttcatcatcggcaacctggatgaaaacggcttcctt
ttggtcagtcctgaagaaatctgcagccagaccgactgcacccccgccgaggccgaccac
ctgctgagccgggtccaggagatggaccccgccggggtcggcgcccaggacctgcgccac
tgcctgctgctgcagctggcgcggctggaagcggcagactcgctggcggcccgcattgtg
cgtgatcatttaagtctgctggaaacccgtaactaccccggcctggccaaggccaccggc
gcctccaccgccgaggtcagcgccgcagtagaggttatcaccggcctcaacccgcggccg
ggcagactgtactccgatgccgacccggtctatatcgtgcccgatgtttatgtttacaag
ctgggcgaagagtacgtgatcatgctcaacgacgaggggctgccccggctgcggatcagc
aactactaccgcgatatcctcgacaaggactccaccgccccgggggcgaccaaggactac
gtccaggataagctgcgctccgccatgtggttgatcaaatccatccagcagcggcaacgg
accatctaccgggtggtggaaagcctgcttaaatttcagcgcgactttttcgagcatggc
gtcaacaagctcaaacccatggtgctgcgcgacgtggccgaggatatcggcatgcatgaa
tccaccatctcgcgggtaaccaccaacaaatacgtccacaccccccagggcaccttcgag
ctgaaatacttcttcaactccaccatctccaccgaggccggcgacggcatggcctcggag
agcatcaagcagcggctaaaaagcatcgttcagcacgaagatcggaaaaaacccttgagc
gacagcgccatcgccgctgttttcagccgcgacggcatccgcctggcccgccgcacggtg
gccaaataccgggagcagttggggattcttccttcaaaattgcgccgccggccttaa
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