Desulfurivibrio alkaliphilus: DaAHT2_2435
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Entry
DaAHT2_2435 CDS
T01244
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dak
Desulfurivibrio alkaliphilus
Pathway
dak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DaAHT2_2435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dak03400
]
DaAHT2_2435
Enzymes [BR:
dak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DaAHT2_2435
DNA repair and recombination proteins [BR:
dak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DaAHT2_2435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_22
TrwB_AAD_bind
Helicase_RecD
HHH_2
nSTAND3
AAA_28
HHH
NPHP3_N
TsaE
PIF1
AAA_18
AAA_5
MeaB
Thymidylate_kin
TraI_hel_assoc_N
CbiA
Rad17
AAA
DEAD
DNA_pol_lambd_f
AAA_25
ABC_tran
AAA_16
NTPase_1
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ADH87100
UniProt:
D6Z067
LinkDB
All DBs
Position
2834436..2836904
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AA seq
822 aa
AA seq
DB search
MQDELKGIVERVTFHNPENGWSVLRVQPFDQRLEAVPVLVHQQRVFAGATMRFLGQWSEH
PRFGRQFKADTALEVKPASAAALEKYLGSGLIKGVGPKTARKIVRHFGDQTLDIFEQEID
RLTEVPGIAEAKLKSISAAWQEHRAIREVMLFLQGHGISTLFAVRIYKEYGDKAIEVVNA
DPYRLAEDIFGIGFFSADQVALSLGFAKDGEPRLMAAIRHVLAAGREQGHCYLTLAQVIA
GVNELLELDIAPRAEGLLAQMAAAGKLMVRTLADSQGNPQTCYYSKTLYYDEETVATRIK
ALLAPVEVDRQRVADWLARYCQNQKMELSAEQQQAVAGVVGRRFAILTGGPGCGKTTATR
VLVRLLEAMGQRVVLAAPTGRAAQRLGEVVGREARTIHRLLEWQGSGFKRRADHPLEGDF
FIVDECSMLDVSLSAALLRAVPPQGQVLFIGDPDQLPPVGAGNVLRDLLNVAAVPAFRLT
KVFRQAAASAIVRFAHQINRSEVPRIDSPFQHPERWQQECDCLFLDADEATREQLHFLGR
VRRHFAPDHGRFREQADPFSFRLEEAVRPYESEFELPEKFRHVDLEQLLGAESRSEELKA
LLKKVHPWSALHYGLSAVEVVKKLYREWIPKYRGQGSAETGIEIQVLSPMTRGSLGTRNL
NEVLQAEINPAGPGRPEVRLGERLFRLGDRVIHTRNNYDLEVFNGDIGVISAVDHEAQTC
EVTFPPDSRRVNYRRDQLPELELAYAITIHKSQGSEFAAVIIPVLSQHYRMLFNNLIYTG
LTRARRLAVLVGSRRALALAVHNRDTAQRQTALVPLLAADSP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgaactgaagggtattgtcgagcgggttacctttcataacccggaaaacggc
tggtcggtgctgcgggtgcagccctttgatcagcgcctggaggcggtgccggtgctggtc
caccagcagcgggtctttgccggggccaccatgcgttttctggggcagtggagtgagcac
ccccgttttggccgccagttcaaggccgacaccgccctggaggtgaagccggcttccgcc
gcggcgctggaaaaatatctcggctccggcttaatcaaaggtgtcggccccaagaccgcc
cgcaaaatcgtgcgccatttcggcgaccaaaccctggatatcttcgaacaggagatcgac
cggctcaccgaggtgccgggaattgccgaggccaagctcaaaagcatcagcgccgcctgg
caggagcaccgggccatccgcgaagtaatgctctttttgcagggccatggcatcagcacc
ctgtttgcggtgcggatctacaaggagtatggcgataaggccatcgaggtggtcaatgcc
gatccctaccggctggccgaggatattttcggcatcggctttttttccgccgaccaggtg
gccctgagcctgggctttgccaaagatggcgagccgcgtctgatggccgccatccgccac
gtgctggccgccggccgggagcaggggcactgctacctgaccctggcccaggtgatcgcc
ggggtcaatgaactgctggagctggacatcgccccccgtgccgaaggcttgctggcccag
atggcggcggcgggcaagctgatggtgcgcaccctggccgatagccagggcaatccccaa
acctgttattattccaagaccctttattacgacgaagaaacggtggcgaccaggatcaag
gccctgctggcgccggtggaagtggaccggcagcgggtggccgactggctggcccgttac
tgccaaaaccaaaagatggagctttccgccgagcagcaacaggcggtggccggtgttgtg
ggccgccgttttgccatcctcaccggcgggccgggttgcggcaagaccaccgccacccgg
gtgctggtgcggctgctggaggccatgggtcaaagggtggtgttggccgcccccaccggc
cgggccgcccagcggctgggtgaagtggtgggccgcgaggcccgcaccattcaccggctg
ctggaatggcagggcagcggcttcaagcgccgggccgaccaccccctggagggtgatttt
ttcatcgtcgatgaatgttccatgctggatgtcagccttagcgccgccctgttgcgggcc
gtgccgccccaaggccaggtgctgttcatcggcgaccccgaccagttgccgccggtgggg
gccggcaacgtgctgcgggatctgttgaatgttgcggctgtgcccgctttccggctgacc
aaggtgtttcgccaggcggcggcctcggccattgtccgttttgcccaccagatcaaccgc
agcgaagtaccccggattgattcccccttccagcacccggagcgctggcagcaggagtgc
gactgcctctttctcgatgccgatgaggccacccgggagcagttgcattttttaggccgg
gtgcgccgccatttcgccccggatcatggccgcttccgggagcaggccgaccccttcagc
tttcgcctggaagaggcggtgcggccctatgaaagcgaatttgaattgccggaaaagttt
cgccatgtcgacctggagcagttgctgggggccgaaagccgttccgaggaactcaaggcc
ctgctgaaaaaggtgcacccctggtcggccctgcattacgggctgtcggcggtggaggtg
gtaaagaaactctaccgggaatggattcccaagtaccgggggcagggaagtgcggagacg
ggtattgaaatccaggtactctcgcccatgacccggggcagcctgggcacccgcaacctc
aacgaggtgttgcaggcggagatcaaccccgccgggccggggcggcccgaggtgcggctg
ggggagcggcttttccgcctgggcgaccgggtaatccacacccgcaacaactacgacctg
gaggtgttcaacggcgatatcggggttatcagcgccgtcgatcatgaggcccagacctgc
gaggtcaccttccccccggacagccgccgggtgaattaccgccgcgatcaactgccggag
ctggagctggcctatgccatcaccatccacaagtcccagggcagcgagtttgccgcggtg
atcatcccggtgttgagccagcattaccggatgctgttcaacaacctgatctacaccggc
ctcacccgggcccgccggctggcggtgctggtgggcagccgccgggccctggccctggcg
gtccacaaccgcgacaccgcccaacgccagaccgccctggtaccgttactggccgccgac
tccccgtaa
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