Desulfatibacillum aliphaticivorans: Dalk_0024
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Entry
Dalk_0024 CDS
T00813
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03030
DNA replication
dal03430
Mismatch repair
dal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dalk_0024
03430 Mismatch repair
Dalk_0024
03440 Homologous recombination
Dalk_0024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dal03032
]
Dalk_0024
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_0024
Enzymes [BR:
dal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dalk_0024
DNA replication proteins [BR:
dal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dalk_0024
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dalk_0024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Ehrlichia_rpt
Trp_leader2
Motif
Other DBs
NCBI-ProteinID:
ACL01734
UniProt:
B8FKB9
LinkDB
All DBs
Position
34706..35698
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AA seq
330 aa
AA seq
DB search
MDPVRHQKRALGFLSGILAKNNVAHALVFTGDAGLGKRQAAVHFAMARNCEGTPDPESAM
FGSQGPCGVCGSCRKILSGNHPDVLFVEKRGASIKIEQIRDLLSVLAMRPSEGKTRVVLI
SGAGDMTASSSNALLKALEEPSDTTCFVLLAGQKSELLPTVVSRCQEIRFSPLPVSFLIE
SLENDGVDPDLAHACAFIASGSLDKARALASDQGLARRNWLVNQLCALEDQGMGQALLLA
EFLAKDKNAAQEDLNWIRTWLRDLLVSRYAPQRVINRDLMGLVNSRSAKTAPEVLLEKLQ
AVADCENDLTRNVNTRLSMENLCMRLSSGG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatccggttcggcatcaaaaacgggctttgggttttttgtcgggaatcctggcaaag
aacaatgtcgcccatgccctggtttttaccggcgacgcgggactgggcaaaaggcaggcg
gctgtgcactttgccatggcgcgcaattgcgagggaactcccgacccggaaagcgccatg
tttggaagccaggggccctgcggggtctgcggctcctgccgcaagattctttccggcaat
catccggacgttctttttgttgaaaaacgaggcgcgtctataaaaatcgaacaaatccgg
gatcttctatccgttttggccatgcggccttccgaggggaagacccgggttgttttgatt
tcgggcgccggcgacatgaccgcttcgtcctccaacgccctgctaaaagccttggaggag
ccgtcggacaccacttgctttgttctgctggccgggcaaaaatcggagttgctccccacc
gtggtttccaggtgtcaggagatccgtttctctcctttgccggtttcctttcttattgaa
agcctggaaaatgacggagtcgacccggatctggcccatgcctgcgcttttatagcctcg
ggcagtctggataaagcccgggctctggcctcggaccaggggctggcccgcaggaattgg
cttgtcaatcagctttgcgccctggaggaccagggcatgggacaggccttgcttttggcg
gagtttctggccaaggacaaaaacgccgcccaggaagacttgaattggattcgcacctgg
ctgcgggaccttttggtcagccggtacgcgcctcagcgggtgattaacagggatctcatg
ggcctggtgaacagccggagcgctaaaaccgccccggaagttctgctggaaaagctccag
gccgtcgcggattgtgaaaatgatctgacaagaaacgtaaacaccaggctttccatggaa
aacctgtgcatgcgtttgtcgtcaggaggatag
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