Desulfatibacillum aliphaticivorans: Dalk_0487
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Entry
Dalk_0487 CDS
T00813
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dal03032
]
Dalk_0487
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_0487
Enzymes [BR:
dal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Dalk_0487
DNA replication proteins [BR:
dal03032
]
Prokaryotic type
DNA Topoisomerases
Dalk_0487
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dalk_0487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACL02194
UniProt:
B8FHA6
LinkDB
All DBs
Position
complement(658050..660485)
Genome browser
AA seq
811 aa
AA seq
DB search
MDLGENMLEISIESEMKKSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFTMHELKNDYNK
PYKKSARVVGDVMGKYHPHGDAAIYDTMVRMAQDFSLRYPLVDGQGNFGSIDGDPAAAMR
YTEVRMQKMAHAILEDLDKETVDFIPNYDETIQEPTVLPTRIPNLLVNGSAGIAVGMATN
IPPHNLGEITDALCALIENPKLMPEELLQYVPGPDFPTGGIIYGRAGIHSAYSTGRGIIK
IRARIMVEKDNRTGKETLVVTELPYQVNKARVIEKIAHLMKDKVIEGLAFVRDESDREGM
RIAMGLKKDEMASIIINKLYKHTQLENSFGIILLSIVNNRPELLNLKETLQYFIAHRKVV
VIRRTKYELAKAEARAHILEGYKIAIDNLDEVVKLIRASSTPLEAREGLMARFDLTQIQA
QAILDMRLQKLTGLEIEKVEEEYRELIKAIARYKEILASDQLVLEIVRDELLEVRTEYVD
ERRTEIVDDEGEITIEDMIVEEDMVVTISHRGYIKRNPLTLYHSQRRGGKGKIGMGTGDE
DFVSRLFVASTHNTLLFFTNLGRVYWRKVYEIPQAGRAAKGKFISNLLNLAPDEQLATVL
DVKEFEPGYNIIMATKDGIIKKTDLLAYSNPRSNGIIALSLGEGDQLIAARISDGTQNVF
LGSAFGKSIRFHESDVRAMGRVSRGVKGMTLAAGDHLVGMEVLTHGKTLFSCTENGFGKR
TSLDEYPLQKRGGKGVITIRTHERNGAVVSILVVSNDDDLMLMTDAGKIIRMPMGDISVI
SRNTMGVRLMGMEPGEKLIGAQRLAEKDEEK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggatttgggagaaaacatgctcgaaataagcatcgagagcgagatgaaaaaatcgtat
ctcgattacgccatgagcgtgattataggccgcgccctgccggacgtgcgggacggccta
aaaccggttcatcggcgtgtgcttttcaccatgcatgaactaaaaaacgattataacaag
ccgtataagaaatccgcccgcgtcgtcggcgacgtcatgggtaagtatcacccccacggc
gatgcggcgatatacgataccatggtgcgtatggcccaggatttttccctgcgctatcca
ctggttgacggccagggcaacttcgggtccattgacggagaccctgcagccgccatgcgt
tatacggaagtccggatgcaaaagatggcccacgccattttggaggatctggacaaggaa
accgtggatttcatccccaattacgatgaaaccatacaagaacccacggtcctgcccacg
cggattcccaacctgttggtgaacggctccgccggcatcgcggttggcatggccaccaat
attccgccccacaacctgggggagatcacggacgccctgtgcgcgctcatagaaaatccc
aagctgatgcctgaggagctgctccaatacgttcccgggccggattttcccacgggcggc
attatctacggcagggccggcattcacagcgcttattccacgggccggggcatcatcaag
attcgcgcccgcattatggtggaaaaggacaaccgcaccggcaaggaaaccttggtggtg
acggagctgccctaccaggtgaacaaagccagggtgattgaaaaaatcgcccatctcatg
aaggacaaggtgatagaaggcctggcctttgtgcgggacgagtccgaccgggagggtatg
cgcattgccatgggcttgaaaaaagatgagatggcatccatcatcatcaacaagctctac
aagcacacccagttggaaaactccttcggcatcatcctgctttccatcgtcaataacagg
cccgagctgctcaatctcaaagaaacgctccagtacttcatcgcccaccggaaggtggtg
gtgatccgccggaccaaatatgagcttgccaaagccgaagcccgtgcacatattttggaa
ggctacaagatagccatcgataatctggacgaggtggtgaagctcatccgggccagcagc
acgcctttggaagcccgggaaggcctcatggccagatttgacctcacccagattcaggcc
caggccattttggacatgcgcctgcaaaagctcaccggcctggaaatcgaaaaggtggag
gaagagtatcgggaattgatcaaagccatcgcccggtacaaggaaatcctggcaagcgac
caactggtgctggagatcgttcgagacgaattgctggaagtcagaaccgaatacgtggac
gaacggcggacggaaatcgtggacgacgaaggggaaatcaccatcgaagacatgattgtg
gaagaagacatggtggtgaccatctcccatcgcggctacatcaagcgcaatcccctgacc
ctgtaccacagccagcgccgcggcggcaaaggcaagatcggcatgggcaccggggatgaa
gacttcgtctcccgcctgttcgtggcttccacccataacacgctgctctttttcaccaac
ctgggccgcgtgtactggagaaaggtctacgaaattccccaggccggaagggccgccaag
ggcaagttcatatccaacctgctcaatcttgctcctgacgagcaattggccaccgtgctg
gacgtgaaagagttcgagccgggatacaacattatcatggccaccaaagacggcatcatc
aaaaagaccgatcttctggcgtacagcaatcccaggtccaacggaatcatcgccctgagt
ctcggcgaaggagaccagctcatcgcagcccgcatcagcgacggcacccagaacgtattt
ttgggctccgccttcggcaagtccattcgtttccacgaatcggacgtgcgggccatgggc
cgcgtttcccggggcgtcaagggcatgaccctcgccgccggagaccaccttgtgggcatg
gaagtgctgactcacggcaaaaccctgttctcgtgcacggaaaacggattcggaaagcgc
acgtccctggacgaatacccgctgcagaagcgcggcggcaagggcgtgatcaccatccgc
acccacgagaggaacggggccgtggtttccatcctggtcgtttccaacgacgatgacctg
atgctcatgaccgatgcgggtaagattatccgtatgcccatgggggacatctcggtgatc
agcaggaacaccatgggcgtgcgcctcatgggcatggagccgggagaaaagttgatcggc
gcccagcggctggctgaaaaagacgaggagaaataa
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