Desulfatibacillum aliphaticivorans: Dalk_0930
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Entry
Dalk_0930 CDS
T00813
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03030
DNA replication
dal03430
Mismatch repair
dal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dalk_0930
03430 Mismatch repair
Dalk_0930
03440 Homologous recombination
Dalk_0930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dal03032
]
Dalk_0930
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_0930
Enzymes [BR:
dal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dalk_0930
DNA replication proteins [BR:
dal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dalk_0930
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dalk_0930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
T2SSK
PHP_C
DUF2161
Motif
Other DBs
NCBI-ProteinID:
ACL02634
UniProt:
B8FI67
LinkDB
All DBs
Position
complement(1250140..1253646)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSDFVHLHVHTQYSLLDGAIRLDALVNQCKEFGMDACAITDHGTMFGILEFYEKAKSKDI
KPIIGCECYVARKSMEDKTPMDKDNRHLVLLAENNQGYENLCRLATLAQRKGFYYKPRID
KKALEEHSKGLICLSACLHGEIPMYISDGQMKLAEESALYYKNLFGPDHFYLEIQNNGLP
EQEEMNQKLAELAEKLDIPLVGTNDCHYLRAKDAKAHEVLLCIQTNKTIHDTNRFKFRTD
QLYLKSPQEMIEYFKGFPGATDNTVKIAEMCNVEFDLSTFHFPQFPTEEGKTEAEILTQM
TWDGFHKRMDAIKAVNPAVDEEKYLERLKYELGVIQDMGFPGYFLIVSDFIQWSKRNGIP
VGPGRGSAAGSLVAYALEITDLDPLEHKLIFERFLNPGRKSMPDIDVDFCILGRERTFNY
VVEKYGGGDYVSQITTFGSMNARAVVRDVGRAMAIPLGEVDVIAKLIPEAPKMTLKKAME
QEPKLLEIMKDKPEIAELIEVAQVLEGLSRHASTHAAGVVIADKPLVEYLPLYEGKKGEV
VTQFDMKRVEKIGLVKFDFLGLRNLTVIDNAIKLIEGQGKTPPDLMHLDVTDKATYNLLS
RGDTTGVFQLESSGMKDLLARLKPECFEDVVAVVALYRPGPLNSGMVDDFVKRKHGDIPV
TYALPELEPILKDTYGVIVYQEQVMQIAAALASYSMSEADDLRKAMGKKIAEKMAQQRIR
FMDGCKENNVDLKKAEALFNLMEKFGEYGFNKSHSAAYALVSFQTAYLKTHFQVEFMASL
MTSEMDNTDNVLKFMSECRDHDIEVLPPDVNTSSVSFTVLEGKIVYGMAAIKGVGQGAVE
AIVEERKANGPFENIFDLCERVDLRRVNKRVLESLVKAGAFDSTGAKRSQLMAVLESAID
HGQRISKEKNDPQMGLFGAIEMPTITPALPDIEEWDDQLKLSYEKEALGFFLTGHPLGKY
EDILIKFANADTLTLPEMPDKSAVRVGGMILSTKNLVTKKGDPMAFITLEDMKGSVEVVV
FPECYKASSHLLVVENALLVEGQLQKEEKGTKILADKIVPIEDADSEWTASVHIRANMDG
MENEVLEQIKEICGKHPGASKAFLHLVDPTKFEAVIELPETNCVAAGKDLAKDLRKLLGP
RAYDTACQPARLANNGNGNGRKKWQKSA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtccatctgcacgtacacacccagtatagccttttggacggggccatc
cgtctggacgccctggtcaaccaatgcaaggaattcggcatggacgcctgcgccattacc
gaccatggcaccatgttcggaattctggagttttacgaaaaggccaaatccaaagacatc
aaaccgatcataggctgcgagtgctatgtggcccgcaagtccatggaggataaaaccccc
atggataaagacaaccgccacctggtgctgctggccgaaaacaaccaaggatacgaaaac
ctgtgcaggctggccaccctggctcagcgtaaagggttttattataaaccgcgtatagac
aaaaaagcccttgaagagcattccaaagggctcatctgcctttccgcctgtcttcacggc
gaaattcccatgtacatctccgacggccagatgaaactggccgaggaatccgccctttac
tataaaaaccttttcgggccggatcatttttatttggaaattcaaaacaacggcctgccc
gaacaggaggagatgaaccaaaaactggcggaactggccgaaaagctggacatccccctt
gtgggaaccaacgactgccattatctcagggccaaggacgccaaggctcacgaagttcta
ttatgcatccaaaccaataaaacgattcacgatactaatcgctttaaattccgaacggat
cagttgtatttaaaatccccccaggaaatgatcgaatatttcaagggatttccaggcgca
acggataataccgtaaagatcgccgaaatgtgcaatgtagagtttgacctcagcaccttt
cactttccccagtttccgacggaggaaggcaaaaccgaagcggaaatcctgacccaaatg
acctgggacggcttccacaaacgcatggacgccatcaaggccgtaaatccggccgttgac
gaggaaaaatacctggagcgcctgaagtacgaattgggcgtcattcaggacatgggcttt
cccggatattttctcatcgtctccgactttatccaatggagcaagcgaaacggcattccc
gtgggaccaggccgcggctccgcagcaggcagccttgtggcctacgccctggaaattacg
gacctggatcctctggagcataagctgatctttgaaaggttcctgaacccgggccgtaag
agcatgcctgatatcgacgtggacttttgcatcctgggccgggagcgcacttttaattac
gtggtggaaaaatacggcggcggggattacgtcagccagatcaccacttttggaagcatg
aacgcccgggccgtggttcgcgacgttggccgggccatggccattcctttgggagaggtg
gacgtcattgcaaagctcatccccgaagcgcccaagatgaccttgaaaaaggccatggaa
caggaacctaagcttcttgaaatcatgaaggataagcccgaaatcgccgagcttattgaa
gtggctcaggttttggaagggctctcccgccacgcctccacccacgccgccggcgtggta
atcgccgacaagcccctggtggaatacctccccttgtatgaaggtaaaaagggcgaagtt
gtgacccagttcgatatgaagcgggtggaaaaaatcgggctggtcaagtttgactttctg
gggctgcgaaatcttacggtcatcgacaacgccatcaagctcatcgaggggcagggcaaa
acgcccccggacctcatgcatttggatgtgaccgacaaggccacgtacaaccttctgtct
cgaggcgacacaacaggcgtgttccagcttgaaagcagcggcatgaaagacctccttgcg
cgccttaagcccgaatgctttgaagacgtggtggccgtggtggccctgtatcgtcccggc
cctttgaattcgggcatggtggacgatttcgtcaagcgcaagcacggggacatccccgtc
acttatgcgcttcccgagttggagcctatcctcaaggacacatacggcgttattgtgtac
caggagcaggtcatgcagatcgcagccgccctggccagttacagcatgtccgaggccgac
gatctccgtaaagccatgggtaagaaaatcgccgaaaaaatggcccagcagcgcatccgc
tttatggacggctgcaaggaaaacaacgtcgacctgaaaaaagccgaagccctgttcaac
ctcatggaaaaattcggcgagtacggctttaataaatcccatagcgcggcctacgccctg
gtttcctttcagaccgcctatctcaagacccatttccaggtcgagttcatggcctccctc
atgaccagtgaaatggacaacacggacaacgtcctcaagttcatgtccgagtgccgggat
cacgacatagaggtccttcctcccgacgtaaacacaagcagcgtcagctttaccgtcttg
gaggggaaaatcgtctacggcatggccgccattaaaggcgtgggccagggcgccgtggaa
gctattgttgaggaacgcaaggccaacgggccgtttgagaacattttcgacctgtgcgaa
agggtggacttgcgccgggtcaataaaagagtgctggaaagcctggttaaggcgggagcc
tttgacagcacgggcgccaaacgctcccagttaatggctgtcctggaaagcgccattgat
cacggccagcgcatctccaaagaaaagaacgatccccaaatgggccttttcggcgccatc
gaaatgccgacgatcacgcctgcattgcctgacattgaggaatgggacgatcagcttaaa
ttaagctacgaaaaagaggcgctgggctttttcctcacaggccacccattgggcaagtac
gaagatatattgattaaattcgccaatgccgacaccctgaccctgccggaaatgcccgac
aaatccgccgtaagggtaggggggatgattttgtccaccaaaaatctggtgaccaaaaag
ggcgaccccatggcctttatcaccctggaggatatgaagggatcggttgaggttgtggtc
ttccccgagtgctacaaagcctcgtcccatttattggtggtggaaaacgccctcctggtg
gaagggcaactccagaaagaggaaaaaggcacaaaaatcctggccgacaaaatcgtgccc
attgaagacgcagactccgaatggacggccagcgtgcacatccgcgccaatatggacggc
atggaaaacgaggtgttggagcagatcaaggaaatttgcggcaaacatccgggcgcgtcc
aaagcctttttgcatttggtggatccgaccaaatttgaagcggtgatagaacttcctgaa
acaaactgtgtggcggccggcaaggacttggccaaggatcttcgcaaattattggggcct
cgcgcttacgacacggcctgccaacccgccaggctggccaataacggtaatggaaacggc
cggaaaaagtggcagaaaagcgcttaa
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