Desulfatibacillum aliphaticivorans: Dalk_1000
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Entry
Dalk_1000 CDS
T00813
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal02020
Two-component system
dal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dalk_1000
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dalk_1000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dal03021
]
Dalk_1000
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dal02035
]
Dalk_1000
Transcription machinery [BR:
dal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dalk_1000
Bacterial motility proteins [BR:
dal02035
]
Flagellar system
Flagellar assembly proteins
Stator
Dalk_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_10
GerE
Clr5
Motif
Other DBs
NCBI-ProteinID:
ACL02703
UniProt:
B8FK28
LinkDB
All DBs
Position
complement(1328155..1328913)
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AA seq
252 aa
AA seq
DB search
MKNAAHVPREKSKERAKRDELITKYAYLAKLCAHRLAMRLPPSVNVDDLISAGIMGLLDA
LDKYDEGRGVKFRTYAEFRIRGAMLDELRAMDWVPRSVRKKVQEIEQAVNRVEKRESRPA
DAEEIANELGVDMDTYQNMLSKAGGIELVSLDEPLWSNDNTKDGRRTHVDLLEDNANPDR
DLMDSEFKKILAQSISSLTPKEQQILSLYYQDELTLKEVGEVMGLTESRICQIHTQCMIK
LRSKLKTQEARM
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgcagcacatgtaccgagagaaaaatctaaagaacgggccaagcgtgatgag
ctgattacgaaatacgcttatctggccaaattatgcgctcatcgcctggctatgcgtctg
ccccccagcgtgaatgtggacgacctcatcagcgcgggcatcatggggctgttggacgcc
ctcgataaatatgacgaaggccgtggcgtaaaattcaggacctacgccgaatttcggatt
cgaggcgccatgctggatgagttgcgcgccatggattgggtcccccgttcagtaagaaaa
aaggttcaggaaatcgagcaggccgtcaacagggtggaaaaaagggaaagccggcctgcg
gacgccgaggaaatcgccaatgagcttggcgtggacatggacacctatcagaacatgctg
tccaaagcgggcggcattgaattggtcagcctggacgaacccctttggagcaacgacaac
accaaggacggccgcaggacccatgtggatcttctggaggataacgctaaccccgaccgg
gatcttatggattcggaattcaagaaaatcctggcccagtccatttccagcctgactccc
aaggagcagcagatcctgtctttgtactatcaggacgagctaaccctcaaggaagtcggc
gaggtgatggggctgaccgagtcccgcatctgccagattcatactcaatgcatgatcaag
ctgagaagcaagctcaaaacgcaggaagcaaggatgtaa
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