Desulfatibacillum aliphaticivorans: Dalk_1292
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Entry
Dalk_1292 CDS
T00813
Name
(GenBank) Sigma 54 interacting domain protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dal03000
]
Dalk_1292
Transcription factors [BR:
dal03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dalk_1292
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
GAF_2
AAA_2
HTH_8
AAA_7
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ACL02995
UniProt:
B8F9P9
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Position
complement(1716027..1717571)
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AA seq
514 aa
AA seq
DB search
MDENKFFREATLRICGSIEIEKALFDCLDYLKNFIPAESVYLHFIDLKEKTGVVYAMADG
GGGRQLNIRFDYPAPVWRLIGDGSDLPEEVLLDRADKGALGKHMLKIAGLSGIRSLMMMR
LSLGSKEVGVIAFEARGESRFRREHLHRLRLLQSPFAVAISNSRRYIELLELKNLLADDN
KYLQQELLSQKSDEIIGADFGLKHVMQQVNKVAPLSSPVLLMGETGVGKEVIANAIHKYS
SRRNEPFIKVNCGAISETLIDSELFGHVRGAFTGAFENKRGRFERAHQGSIFLDEIGELP
KAAQLRLLRVLQEMEFEPVGSAKTIKVDARVIAATNRNLEDMVAEGSFRKDLYFRLKVFP
IYIPPLRERACDIPALTQYFMHKKYREMGFAEYPSLAPGAVKRLEAYEWPGNVRELENAV
ERAMIVSGGKTLHFDDSGFEKPRCVPEEAPHDAEDSPAMLDEVISSHIIKMLHRTKGKIN
GEDGAARAMGVNPATLRNKMRKLGIPFGRGVQYK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacaaattcttccgggaagccaccctgcgcatctgcgggtccattgaaatc
gaaaaagccctgtttgactgcctggattatttaaaaaatttcattccagccgagagcgtc
tatctccattttattgatttaaaggaaaaaacgggcgttgtttacgcaatggcggatggc
ggcggagggcggcagttgaatatccggttcgactaccccgccccggtttggcggctcatt
ggagacggctccgacctgcctgaagaagtgcttttggatagggcggataagggcgccttg
ggaaagcacatgctgaaaattgcaggcctttccggtatacgctccctcatgatgatgcgc
ctgagcctgggcagcaaggaggtgggggttatcgcctttgaagccaggggggagagccgc
ttcaggcgggagcaccttcacaggctgcgattattgcaatcccccttcgctgtggccatc
tccaacagccgcagatacatcgaattgctggagttgaaaaatctcctggcggatgacaac
aaataccttcaacaggagcttctttcccaaaaaagcgatgagattatcggcgcggacttc
ggcctcaagcacgtgatgcagcaggtgaacaaggtagcgcccctttccagccccgtcctt
ctgatgggggagacgggcgtgggcaaggaggtgatcgccaacgccattcacaagtactct
tccaggcggaatgagccgttcatcaaggtcaactgcggcgccatttctgagaccctgatc
gacagcgagcttttcggtcatgtgcgaggcgcgtttacgggcgcctttgaaaacaagcgc
ggccggtttgaaagggcgcaccagggcagcatcttcctggatgaaatcggcgaactcccc
aaggccgcccagcttcggctcctgcgcgtcttgcaggaaatggagtttgaaccggtggga
agcgccaagaccatcaaggtggacgcccgggtcatcgccgccaccaaccggaacctggag
gatatggtggcggaaggctcgttccgaaaggatctgtatttcaggctgaaggtgtttcct
atctacattcctcccctcagggagcgagcttgcgacattcccgcgcttacccaatatttt
atgcacaaaaaatatcgggaaatgggctttgccgagtatccttctttagccccgggagcc
gtaaaaaggcttgaggcttatgaatggccgggcaatgtgcgcgagttggagaacgcggtg
gaaagggccatgatcgtcagcggaggaaagacgctccatttcgacgattccggatttgaa
aagccaaggtgcgttccggaggaggcgccccatgacgcggaggactcccccgccatgctt
gatgaggtgatctcgagccatatcataaagatgctgcatcgaaccaaggggaagatcaac
ggagaggacggcgcggcccgggccatgggcgtcaacccggctaccttgcggaacaaaatg
agaaagctgggcatccccttcggccggggagtccaatacaaatag
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