KEGG   Desulfatibacillum aliphaticivorans: Dalk_1956
Entry
Dalk_1956         CDS       T00813                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
dal  Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:dal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dal03016]
    Dalk_1956
Enzymes [BR:dal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Dalk_1956
Transfer RNA biogenesis [BR:dal03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Dalk_1956
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DNA_pol_A_exoN
Other DBs
NCBI-ProteinID: ACL03652
UniProt: B8FEX5
LinkDB
Position
complement(2540609..2541775)
AA seq 388 aa
MPNKPVLHKPEDPDFVLVDNDNALADLTQSLQSQKCIAVDLEADSMFHYQEKACLLQITS
NGLNYIVDPLCDCDVKALAPILENDEIQKIFHGADYDVRCLFRDFGIELHNLFDTQVAAR
FLGEPQTGLAPLLESRFGVQLEKKYQKKNWSLRPLPPEMMAYAANDTVHLLELAEILKKE
LVEKDRLFWVEEECEILTHARPMPPNDGPLFLRFRGAGKLDPRSLQVLENILHVRDDLAK
KWNRPLFKVLGNTPILEMAQKRPLNTKGLVSLHGFSPKQAKMFGHELIRAIKAGKSVPDE
KLPSYPRKKRPPLNPKAPKRAKVLKDWREKMGEELGVESSVVLTNAQIQAMASNKPRSIR
ELDECQEVRQWQKKVFGQTLVELLKAVP
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgcctaataaacccgttctccataaacccgaagaccctgattttgttctagttgataat
gacaacgctctggccgatttgacccaaagcctgcaatcgcaaaaatgcatcgccgtggac
ctggaagcggactccatgttccattaccaggaaaaggcctgcctgctgcaaattacttcc
aacggtttgaactatattgtagaccccctgtgcgactgcgacgtcaaggctctggcgccc
atcctggaaaacgacgaaatccagaagatcttccatggagcggattacgacgtgcgctgc
ctgttccgggattttggcattgaactccacaacctgttcgacacccaggtggccgcccgt
tttctgggagagccccaaaccggcctggcgccgcttttggaaagccggttcggcgtgcag
ctggaaaagaaataccagaagaaaaactggtccctccggccactgccgcccgaaatgatg
gcctacgccgccaacgacaccgttcatcttttggaactggccgagatcctgaaaaaggaa
ctggtggaaaaggaccgcctgttctgggtggaggaggaatgcgaaatcctgacccacgcc
cggcccatgccgcccaatgacggccccctgttcctccggtttcgcggcgccggcaagctg
gatccccgaagccttcaggtgctggaaaacatcctccacgtccgggacgatctggccaaa
aaatggaaccggcctttgttcaaggtcctgggcaacacgcccatcctggaaatggcccaa
aaacgcccgctcaacaccaaagggctggtgtcccttcacggattttcgcccaaacaggcc
aagatgttcggacacgaactcatccgggcaatcaaggcgggcaaatccgtgcctgatgaa
aaactgccctcctacccgcggaaaaaacggccgcccctgaaccccaaagcccccaaacgc
gccaaggtcctcaaggactggcgggagaaaatgggcgaggaactgggcgtggaatcctcc
gtggtgctcaccaacgcccaaatccaggccatggcctccaacaagccaagatccatcagg
gagcttgacgaatgtcaggaagtccggcaatggcagaaaaaagtcttcggccaaaccctg
gtggaactgcttaaagccgtgccctga

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