Desulfatibacillum aliphaticivorans: Dalk_1998
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Entry
Dalk_1998 CDS
T00813
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03030
DNA replication
dal03430
Mismatch repair
dal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dalk_1998
03430 Mismatch repair
Dalk_1998
03440 Homologous recombination
Dalk_1998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dal03032
]
Dalk_1998
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_1998
Enzymes [BR:
dal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dalk_1998
DNA replication proteins [BR:
dal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dalk_1998
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dalk_1998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_5
RuvB_N
AAA_22
AAA_30
AAA_19
AAA_14
AAA_16
ResIII
AAA_24
AAA_18
Rad17
PIF1
TsaE
AAA_28
DEAD
nSTAND3
AAA_2
Torsin
Mg_chelatase
NPHP3_N
Sigma54_activat
RNA_helicase
Cytidylate_kin
ORC-CDC6-like
DNA_pol3_delta_C
ABC_tran
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
ACL03694
UniProt:
B8FG14
LinkDB
All DBs
Position
2590080..2592200
Genome browser
AA seq
706 aa
AA seq
DB search
MSYLVLARKYRPQTFDEVVAQPHITETLKNAINQERVAHALCLSGPRGTGKTTVARILAK
AMNCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPALGNY
KVYIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTESHKIPVTILSRCQRYDFKRISL
DDIVGHLAKLAGLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEASFEKVLDI
LGVAGRKSLFALAQALLDRDVPACLTAVDQLYARGYDLKQVMADLLDHLRDLTVVKTVRD
PGPLLDIPPGEIQAMQEQVANASPAFVNQVLSLLFKEEAAVRLSPQPRLALEVALIRICE
ITPAVAIDSLVAALEVLASQPASKDQIINIGPASGPAPALPESGGGSAPPAPEETTASAA
EAAPQHEESTPVAASDPQTEPEPQEALAPEPEPEPEPEKEVTPEPEPEPEPPEEKPQAAP
EPQAPVESAPPEPEEESIPEQAADSDAYQADDESPYYPEPDPTYAAADSEPIIPDMEPDY
GPPQYETREVQPYVVQEAATPEEPAAPAPEPEEDEPEPPPFEGDPWKAFSKDVQEKSIML
GLTLEKCRLKEYEKGRFVLETDGAPFSRDQLNTPENQTILTGVCKSLFGRKVQFVIEEPS
EENRTAPVMNQAEKRRELEQEALNHPLVEEAVRIFGGKVVEIRQME
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcttgttctggccagaaaatacaggccccagacctttgacgaggtggtggcc
cagcctcatattaccgaaaccctgaaaaacgccatcaatcaggagcgggtggcccacgcc
ctgtgcctttccggcccccgcggcacggggaagaccacggtggcccgcattctggccaag
gccatgaattgcgtgaacggccctacgcccgagccctgcggcgtgtgcgcctcgtgcaag
gagatcgcggccagcaacgcggtggacgtgtttgaaattgacggagcgtccaacaacagc
gtggagcaggtgcgggagcttcgggaaaacgtgcaatacgccccggccctgggcaattac
aaagtgtacatcatcgacgaagtgcacatgctctcccaggcggcctttaacgcgctcttg
aaaaccctggaggagccgccgccccacgtgatgttcatcctggccaccacggaaagccac
aagattccggtaaccattttatcccgatgccaacgctacgatttcaagcgcatcagcctg
gacgacatcgtgggtcatcttgccaaactggcgggcttggaaaacttcaccatcgaggag
caaagcctgtgggccgtggcccggcggtccggcggctgtatgcgcgacgcgttgagcctc
ttggatcaggtcatggcctattccacgggcgaggcctcctttgaaaaggttctggacatc
ctgggcgttgccggacgcaagtccctgttcgccctggcccaggcccttttggaccgggac
gtcccggcctgcctgacagccgtggaccaactttacgccaggggatacgacctgaagcag
gtcatggccgaccttttggatcacttgcgagaccttaccgtggtgaaaacggtccgggat
cccggcccgctcctggacattccgcccggcgagatccaggccatgcaggagcaggtcgcc
aatgcgtctcctgctttcgtaaatcaggttttgagcctgctattcaaggaggaggccgcg
gtcaggctgtcgccccagcccaggctcgccctggaagtggctctgatccgcatttgcgaa
atcaccccggccgtcgccatagactctttagtcgccgccttggaggttctggcctctcag
ccggcgtccaaagaccagattataaatatcggcccggcatccggcccggcgcccgccctg
ccggagtccggcggtggaagcgctcctccggcgccggaagaaacaacggcttccgcagcg
gaagcggcgcctcaacacgaggaatccactcctgtcgccgcgtctgaccctcagaccgaa
ccggagccgcaggaagcacttgcacctgagccggagcccgaaccggagccggaaaaggaa
gttacaccggaaccggaacccgagcccgaaccgccggaggagaagccccaggcggcgccc
gaaccgcaagctcctgtggagagcgccccgccggagcctgaagaggaatccattcccgag
caggctgccgactcggatgcctatcaggcggacgacgagtcgccttattatcctgagccg
gatcccacatacgctgcggccgactccgagcccattatcccggacatggagccggactac
ggtcctccccaatatgaaacccgggaggttcaaccgtacgtcgtccaggaggctgcaacg
cctgaagaacccgccgccccggccccggagccggaagaggacgagcctgagccgccgcct
tttgaaggagatccgtggaaggctttttccaaggatgtgcaggaaaaaagcattatgctg
ggcctcacccttgaaaaatgccgtttaaaggaatatgaaaaaggccgcttcgtcctggaa
accgacggcgcgccattttcgcgggaccaattgaacaccccggaaaatcagacgattctc
acgggcgtatgcaaaagcctcttcggccgcaaggtgcaattcgtcatcgaagagcccagc
gaggaaaaccggaccgccccggtcatgaaccaggcggaaaagcgccgggaactggagcag
gaggcgttgaaccaccccctggtggaggaagcggtgcggattttcggcggcaaggttgtg
gaaattcgtcaaatggaataa
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