Desulfatibacillum aliphaticivorans: Dalk_2956
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Entry
Dalk_2956 CDS
T00813
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_2956
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dalk_2956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_16
DUF7125
AAA_22
nSTAND3
NTPase_1
GvpD_P-loop
AAA_24
AAA_14
AAA
RecA
Rad51
DUF7129
CbiA
NACHT
SLFN-g3_helicase
PAXNEB
NPHP3_N
ATPase_2
IstB_IS21
AAA_5
HypA
MeaB
AAA_33
DAP3
KdpD
DUF815
AAA_30
TIP49
MCM
ABC_tran
AAA_10
ZnF_RZ-type
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ACL04646
UniProt:
B8FL11
LinkDB
All DBs
Position
3794799..3796169
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AA seq
456 aa
AA seq
DB search
MKKAQKTVFTCQDCGYTTPKWMGKCPDCGQWHSMVEGKPKAASSGLKAPFDLSGPGSRPV
PIDSVDGIVEDRLATGIMELDRVLGGGLVAGSMVLIGGDPGIGKSTLMLQVMQSLAYAGL
KVLYVSGEESVRQIKLRSQRTGSPSPNLFVYSEIVLEQILDVLDQEKPQAVVLDSVQTLY
SQDLTSAPGSVSQVREVTFKLAMHAKKTGIPTFLVGHVTKDGAIAGPRLLEHMVDTVLYF
EGERNHIYRVLRAVKNRFGSTNEIGVFEMAEHGLMEVSNPSAVFLSERPEHASGSAVTAS
LEGSRPILLEIQALASTSSFASPRRTVLGLDSNKVALLVAVLEKKVGMPLMDQDVFMNVA
GGVRVTEPAVDLAMVGAVASSFLDRPVPRDTVLMGEVGLTGEIRGVGQMETRIKEAAKMG
FEQCLAPASSLRNLRTPSGMKVVGVKSVSQALEHLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagcccaaaaaacagtattcacctgccaggattgcggatacaccacccctaaa
tggatgggcaagtgcccggattgcggccagtggcacagcatggtggaaggcaagcccaag
gccgcatcatcgggactcaaggccccctttgacctgtccgggccggggtcgcggcccgtg
cccattgactccgtggacggcattgttgaggaccgcttggccacgggcatcatggagttg
gatcgggttctgggcggggggcttgtggccgggtccatggtgctgatcggcggggatccg
ggcataggcaagtcaactttgatgctgcaggtcatgcagtccctggcctatgcgggcctg
aaagttttgtacgtatccggcgaggagtccgtcaggcagatcaaattgagaagccagcgg
accgggtcgcccagccccaatctgtttgtgtacagcgaaatcgtcctggagcagattctg
gacgtgttggatcaggaaaagccccaggccgtggttctggactcggtccagaccttgtac
agccaggacctgacctcggccccgggctcggtcagccaggttcgggaagtcaccttcaaa
ctggccatgcacgcaaagaaaaccggcatccccacctttcttgtgggccatgtgaccaag
gacggggcaattgccgggccgcgccttctggagcatatggtggacacggtgctttatttt
gaaggggagcggaatcatatttaccgggtgttgcgggccgtgaaaaacaggttcggctcc
accaatgaaatcggggtttttgaaatggccgaacacggccttatggaagtgagcaacccc
agcgccgtgtttttgtccgagaggccggagcacgcctcgggctcggcggtcacggccagc
ctggagggctcccgccctatcctgctggaaatccaggcgcttgccagcacctccagcttt
gccagtccgcgccggaccgttctgggcctggactccaacaaggtggcgcttttggtggct
gtcctggaaaaaaaggtcggcatgcccttgatggatcaggacgtgttcatgaacgtcgcc
ggcggcgtgcgggtgaccgaaccggccgtggacctggccatggtgggcgccgtggcctcc
agctttttggacaggcccgtgccccgggacacggtcctcatgggagaagtgggcctgacc
ggagaaatccgcggcgtgggccaaatggaaacccgcatcaaggaagccgctaaaatgggc
tttgagcaatgcctggcgcccgcgtccagcctgcgcaacctgcggacgccctccgggatg
aaggtggtgggcgtaaaatccgtcagccaggccctggagcaccttttttga
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