Desulfatibacillum aliphaticivorans: Dalk_3149
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Entry
Dalk_3149 CDS
T00813
Name
(GenBank) Crossover junction endodeoxyribonuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dalk_3149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_3149
Enzymes [BR:
dal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Dalk_3149
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dalk_3149
RecFOR pathway proteins
Dalk_3149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
ACL04839
UniProt:
B8FBT6
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All DBs
Position
4004436..4004942
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AA seq
168 aa
AA seq
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MKVLGIDPGLAATGLALVNGTSTQVFGYSFGTITTPPESPLTDRLIHIYDRIREVAEAER
PDLMVVEDIFSLGKYPKSGITLGKVTGAILVAGRHGRIPVREVAVREVKKILTGNGAADK
NQLERAVRQRLGREEAIRPSHASDAMALALIGLYRGDHYLRNGLDRIS
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcctgggcatagatccgggactggcggccacgggcttggccctggttaacgga
acgtccacccaggttttcggctattcgttcggaaccatcaccactccgccggagtcgccc
ctgactgaccggctcatccacatttacgaccgcatacgcgaagtcgccgaggcggaacgc
cctgacctcatggtggttgaggacattttttcccttggcaaataccccaaatccggcata
accttgggcaaagtcacaggagcgattctggttgcgggccgccacggacgaattccggtc
cgggaagtggccgtgcgcgaggtgaaaaaaatcctgaccggaaacggagcggcggacaaa
aaccagcttgaacgggctgtgcgccagcgtttaggcagggaggaggccatcaggccctcc
catgcttcggacgccatggcactggcattgataggcctataccgcggagaccattatctg
aggaacggacttgatcggatatcttga
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