Desulfatibacillum aliphaticivorans: Dalk_3237
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Entry
Dalk_3237 CDS
T00813
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dal03009
]
Dalk_3237
Enzymes [BR:
dal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dalk_3237
Ribosome biogenesis [BR:
dal03009
]
Prokaryotic type
ribosomal protein modification factors
Dalk_3237
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
DUF5005
DMAP1
Motif
Other DBs
NCBI-ProteinID:
ACL04927
UniProt:
B8FGL8
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All DBs
Position
complement(4113593..4114948)
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AA seq
451 aa
AA seq
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MNSNTDNQEIVHLVSLGCVRNLVDSELILGALASGGFALTEDPAEAETIIINSCGFVRAA
VDETIDVVLEMAHYKEEGRCQRLVLCGCMAQRYGKELEEALPELDMVVGPGAHKDIVELL
RRPTGFICQVPDPSTAPLQQASFPRICSTPHMAYIKISEGCPDRCTFCMIPQLRGAWRSR
PLDDIVEEAGNLIQWGAKEIILVAQDTTAYGLDFDKQNRTSLDQLLSSLCRLEGETRFRF
LYGHPNRVTDALLETAASQPRVCSYFDLPVQHGSDRILKMMGRKNTRDEMLRLFEKIRAT
VPDVALRTTALVGFPGETEEDFNQLVEFVQEARFDHLGVFAYSDAEEIPSHRLPDHVPED
TAIKRRDYIMDRQNTISLDNNADRVGKTYTALVLGESGDPEYPYWGKTCLQAPDVDGVTF
IQGEDLGPGRLARVTVHGADVYDLLAETKDE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaacactgacaatcaggaaatcgttcatcttgtcagcctgggatgcgttcgc
aacctggtggacagcgaactgattctgggcgccctggcctcggggggcttcgccctgacc
gaggatccggccgaggcggaaaccatcatcatcaactcctgcggttttgtccgggccgcc
gtggacgaaaccatcgacgtggttttggaaatggcccactacaaagaggaaggccggtgc
caaaggcttgtcctgtgcggctgcatggcccagcgatacggcaaggaattggaggaggcc
cttcctgaactggacatggtggtggggccgggcgcgcataaggacatcgtggaactgctt
aggcggcccacaggttttatctgccaggttcccgatccatccacggcgcccttgcagcag
gcgagcttcccaaggatttgcagcacgccccatatggcctacatcaaaatttccgaaggc
tgcccggaccgctgcaccttttgcatgatcccccaattgcgcggggcgtggcgaagccgg
cccctggacgacattgtggaggaggcgggaaacctgatccagtggggggccaaggaaatc
atcctggtcgcccaggacaccacggcctacggcctggattttgacaagcaaaaccgcacc
agcctggatcaactcttaagcagcctctgccggttggaaggggagacgcgcttccgcttt
ttatacgggcatcccaaccgggtgacggacgcgctgcttgagacggcggcctcccagccc
cgggtgtgctcttatttcgacctgcccgtgcagcacggcagcgaccgcattttgaaaatg
atggggcgaaaaaatacacgggacgaaatgctccggctgttcgaaaaaatccgggcgaca
gtccctgacgtcgccctgcggaccacggccctggtgggcttcccgggcgaaacggaagag
gatttcaaccaactggtggaatttgttcaggaggcgaggttcgaccacttgggagttttc
gcctactcggacgccgaggaaatcccctcccaccggctgcctgaccatgtgccggaggat
acggctatcaagcgccgggattacatcatggacaggcagaacacgatttcgctcgacaat
aacgccgaccgtgtgggaaaaacctacacagctttggtgctgggggaaagcggcgatccc
gaatacccgtattggggaaaaacctgcctccaggccccggacgtggacggcgtgaccttc
atccagggggaagacctggggcccggccgactggcccgcgtgaccgtgcacggggcggac
gtctacgacctgttggcggaaacaaaagacgaataa
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