Desulfatibacillum aliphaticivorans: Dalk_3392
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Entry
Dalk_3392 CDS
T00813
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dal03000
]
Dalk_3392
Transcription factors [BR:
dal03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dalk_3392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
TPR_12
GAF_2
GAF_3
AAA_5
TPR_2
AAA_2
TPR_MalT
TPR_10
AAA
HTH_8
ComR_TPR
Mg_chelatase
AAA_16
MCM
AAA_3
AAA_30
nSTAND3
SNAP
Motif
Other DBs
NCBI-ProteinID:
ACL05081
UniProt:
B8FLD5
LinkDB
All DBs
Position
4302420..4305527
Genome browser
AA seq
1035 aa
AA seq
DB search
MNTQSIPPNNLQRIQEVAALMEGEFNVDWLAELTGLKAHQVLAELQSIVDQRILTSPQPG
IYAFRAPAKREQWTTHMKPDAKASVHKRIAALLMEDLPDNDEKYERVAHHLIHIANDING
CRILCRAGDVHRRSFRTEQAFQCFHKALLDLDHQSGETADQLFVETAIKYSKISTARHDT
TWVLALLNRAMKRAKRRHSGADSALLEMHIAKNEWLSANYDQALAHFEKGWALAKTIDDP
HLADAMTAFSTFFLYWEGRFTEAVESYERVVTGVEQYPRSRFPLLGAITVGYSYAQVGNY
AQGIGMLDSIRTHCLEKGDLYLASYAIGNIGEIMLKLGRLDEALVYMEMSLKLARETNNR
WVWMILQIFLAYTFFQLGKKKRTALHLQKFLEYREEAQAMVLPYSYLLHLALAMEKGDLA
PVSGLSLEVEIQRMQCSNNIYMKGIGARFAALKLEQENSPPGKVREAFETSIRYLEMAGN
QMSLIRSRLETARYLRKIGDPGAGDKLTTQVSQSLASMDEKLVPDDLRHMVSRDGNSKKL
LREILELGQELVKIRDYHELVQRIISTGNRVTGAERGAIFMSEKGNSGKEELRLKASRNL
TSDHVANPSFVSSMKMIEMVAASGRGLIAGVESTDTEGYSSEGAIQSKICVPLCLHDQVV
GVLYHDNRLLASAFREEDLDVLSYFSALAAIALDNARAYDQIRRWNIKLSREKQYYEEAH
LSYLQFDEIVGHSPAINEVLSKIEQVANTETTVLITGETGVGKELVARAIQKHSSRAQQP
FIGVQLSALPKDLMASELLGHEKGAFTGATHRQAGRLELADGGTLFLDEIGDISHDIQIR
LLRVLQTRQFERVGGMKTLSSDFRLIAATNRELESLVRDGRFRADLYYRLNVFPIYVPPL
RDRREDIPLLAMHFLKLHAAKLNKQVMRISDREMDMLKEYDWPGNVRELKNVVERGVILS
TNRDFRMPELQSGDCPPLTVGDTATLAENERSHILRILKRTGWKVAGASGAAKILDIPPS
TLSFRMNKLGIKRPG
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacaatcgattcccccgaacaacctccaaagaattcaggaagtcgccgcgctt
atggaaggggaattcaatgtggactggttggcggaactgaccggccttaaagcccaccag
gtcctggccgagttacagagcattgtggaccaaagaattctcacctctccccaaccaggc
atctatgccttccgggcgcccgccaagcgagagcaatggaccacgcacatgaaaccggat
gccaaagcttcggtgcataaacggatcgctgctttgctcatggaagacctgcctgacaat
gacgagaaatacgagcgtgtggcccaccacctcatccatattgctaacgacattaatggc
tgccgcatattgtgtcgggccggggatgttcatcgtcgatcctttcgcacagaacaggct
ttccagtgtttccacaaagccttattggacctggatcatcaaagcggtgaaacagcagac
cagctttttgtggaaacagccatcaaatactcaaaaatttccacggcccgccatgatacc
acatgggtgctggccctgctcaatcgtgccatgaaacgggcgaaaaggcgccatagcggc
gctgacagcgccttactggaaatgcatatcgcaaaaaacgagtggctgagcgccaattat
gaccaggccctggcccattttgaaaagggatgggccctggccaaaaccatagacgaccct
cacctggcagatgccatgaccgccttcagcaccttttttctttattgggagggacggttt
accgaggccgtggaaagctatgagcgggtggtgaccggagttgagcaatatccccgttcc
cgctttcccctgttgggcgccattacagtgggttatagctacgcccaggtgggcaactac
gcccagggaattggaatgctggattctatccgtacccattgcctggaaaagggagactta
tacctggcctcctacgccatcggaaacattggtgagatcatgctcaagctggggcgtttg
gatgaggccctcgtttatatggagatgagtctgaagctggcccgggaaaccaataaccgc
tgggtttggatgatactccaaatttttctggcctacacttttttccaactaggcaaaaaa
aagcggacagccttgcatttgcaaaaatttctggagtatcgggaagaggcccaggccatg
gtcttgccctattcctacctgcttcatttggcactggccatggaaaagggagaccttgcc
ccggtatcggggctttccctggaggtcgaaatccagcgtatgcaatgctccaacaatata
tacatgaaaggcataggggcgcgatttgcggctctgaaactggagcaggaaaacagccca
ccgggaaaagtcagggaggcctttgaaacctccattcgatacctggaaatggcgggaaac
cagatgtccctgattcgatcccgcctggaaacagcccgttatctgagaaaaataggggat
ccgggagctggggataaactcactactcaggtctcccaaagcctggcttccatggatgag
aaattggtgcccgatgacctgcgccacatggtgagccgggatggcaattccaaaaagcta
cttcgggaaatcctggagttgggacaggaattggtcaagatccgtgactatcatgaactg
gtacaacgcattatttccactggcaaccgggtgacaggggcggaacggggcgccattttt
atgagtgaaaaaggcaattcaggcaaggaggaattgcgcctgaaggcgtcccgcaacctc
accagcgatcatgtggccaacccttcctttgtctcatccatgaaaatgatagaaatggtg
gcggcctcgggcaggggcctgattgcaggggtggagtccacggatacggaaggatacagc
agcgaaggggctatccagtccaaaatatgtgttcccctttgcctgcatgaccaggtagtg
ggggtgctctatcatgacaatcgcctgttggccagcgcattccgggaagaagacctggat
gtcctgtcgtatttttcggccttagcggctattgccctggataatgctcgggcctatgat
cagattcgtcgttggaacatcaaactaagccgagaaaaacaatattatgaagaagctcat
ctcagttatctccagtttgatgaaattgttgggcatagcccagccattaatgaagtttta
tctaagattgagcaggtcgccaacacagaaaccactgtactcataaccggggaaactggc
gtgggcaaggagttagtggcacgggccatccaaaagcacagcagccgtgctcagcaacct
tttattggggttcagctcagcgcccttcctaaggatttgatggccagcgaattgctgggt
catgaaaagggcgcgtttacaggggcaacccaccgtcaggcgggacgactggaactagct
gatgggggcacattgttcctggatgaaattggggacatttcccacgacatccaaattcgc
ctgctgcgggttctccagacccggcagtttgaacgggtggggggaatgaaaaccctgtct
tctgatttccgtctcattgcggccactaaccgggagttggagtccctggtaagggacggc
cgcttcagagcggatctgtactatcggctaaacgtgttccccatatatgttccaccgcta
agggatcggcgggaggatattccgctgctggctatgcacttcctcaagctccatgcagcc
aagttgaataaacaggtcatgcgaatttccgaccgggaaatggatatgcttaaggaatat
gactggccaggtaatgtccgggaactgaaaaatgtggtggaaaggggagttattttgagt
accaacagggactttcggatgccagagctccaaagcggcgattgcccccccctgaccgtg
ggcgataccgccactttggcggaaaatgagcgatcccacatattgcgtatactcaagcgg
acgggctggaaagtcgcgggcgcttccggtgcagcaaaaattttggatatccccccgtcc
actctgtcatttcgtatgaacaagctgggaatcaagcgtccaggatga
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