Desulfatibacillum aliphaticivorans: Dalk_3493
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Entry
Dalk_3493 CDS
T00813
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dal03016
]
Dalk_3493
Enzymes [BR:
dal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Dalk_3493
Transfer RNA biogenesis [BR:
dal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dalk_3493
Prokaryotic type
Dalk_3493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACL05181
UniProt:
B8FBX6
LinkDB
All DBs
Position
complement(4429213..4429950)
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AA seq
245 aa
AA seq
DB search
MKRNFKLILEYDGTHYHGWQRQPHDLTIQEVLEGALEKITRQKCVVYGAGRTDSGVHALN
YVANFRCNTHLDAGVFVKALNSTLPKDIVCKESTLAPDGFHARKSAVSKIYEYHITNGPT
PPAVCRQYAWHVRRRLDKEAMTRAAKLFLGSHDFSAFEGAGSPKATSVRNIMQSHIQSWE
NHIIYRVEANGFLRYMVRNIVGTLVYIGMGKIPPEAVMDILASGDRGQAGPTAPPEGLFM
MCVKY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggaatttcaagctcatactggaatacgacggaacgcactaccacgggtggcaa
aggcagccgcacgacctgaccatacaggaggtgctggaaggcgctttggaaaaaatcacc
cggcagaagtgcgtcgtctacggcgcgggccggacggactccggcgtgcatgcgctcaat
tacgtcgccaacttccggtgcaacacccatctggacgccggagtgtttgtcaaggccttg
aattccaccttgcccaaagacatcgtatgcaaggagtccaccctggcgccggacggtttt
cacgcgcgaaaaagcgcggtgagcaaaatctacgaatatcacattacaaacggccccacg
ccgccggccgtctgccgtcaatacgcctggcatgttcgcaggcgtttggataaggaagcc
atgacccgggccgccaaactgttcctgggctcgcacgatttttccgccttcgaaggcgcg
ggcagccccaaggccaccagcgtgcggaacatcatgcagtcccacatccagtcctgggaa
aaccacattatctaccgggtggaggccaatggcttcctgcgctacatggtccgcaacatc
gtgggaaccctggtgtatatcggcatgggcaaaatcccccccgaggcagtcatggatatt
ctggcgtcgggagaccggggccaggcaggccccaccgcgccgccggagggtttgttcatg
atgtgcgtaaaatattga
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