Desulfatibacillum aliphaticivorans: Dalk_3915
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Entry
Dalk_3915 CDS
T00813
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dal
Desulfatibacillum aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dal03000
]
Dalk_3915
Transcription factors [BR:
dal03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dalk_3915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
TPR_12
GAF
TPR_2
GAF_2
GAF_3
TPR_8
TPR_1
AAA_5
DUF3369
ANAPC5
AAA_2
ARM_TT21_4th
Mg_chelatase
HTH_8
TPR_10
TPR_16
nSTAND_NTPase4
nSTAND3
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
ACL05601
UniProt:
B8FJD2
LinkDB
All DBs
Position
4932960..4936076
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AA seq
1038 aa
AA seq
DB search
MPDLNTPSSFSTLDDHGLLSLMAMFEDNFSVDWILEMSGLKASEILQELDGLFEKKILQK
EGPGVYSFRNEAQRKKIAQSVPQAEKELWHRSIAGIYFREMQSQDEAVLAASSHLIHLKN
GEQECKVLMKAGDIYRKTHRHQKALQCYQKIIDDLEMSTSSQAYELFTNAVIAVSKIVEL
APDVEATVPPLKTAVQKARDRKDDAHTALLEMHLAKNEWFCSHFNQAMRHFNRGWALAEK
IDDPTLKRSAVFLSTFFLYAQGRLREVIRNYEEVVSDIDKYPRGRFPMLSAQVVGVCYAF
NGQIKRGMGLMDAIYEKCRSVGDLYVGSYVGYHIGSLLIELGQYEEAIYYLDLALDHALQ
TNNTYNSILISLNLALAHFRNHNQKEAVSYLSEAVRVTRERGIKIETHIYQNAEMFWAME
QGQLPAVQAALAMEDLKEWQKSRNILIKGGAYRYQALLEEKRGVETSKVLRSMKLSEKWL
EESGHEIQLARTRMEMARLYLSMGQEKKAKGAMQKSAELLDSFLHDQVPDNLRFLLKDLR
TDKNLLEEIMKLGQELATIRNDRDLVRHILATVNRITGAERGAVFLVNKETGKPAVVLRA
ARNIMEQDISRPEFQSSMKMVREAAFTGRARFRLTEAPRQSHPLENKVVHSCICVPMKFR
ETVLGVLYVDNRIFPSALKESDIRILDFFSSQAAIALDNARIHEQNRALIRKLEEEKRYL
EEQQSEFQPPVEFVGECAAVRKVLNDVKKIAATDSTVLILGETGVGKELISTAIHERSSR
AGKPFIRVNCSMFPEGLIASELFGHEKGAFTGADKRRLGRFELADGGTLFLDEIGDISHE
VQVRLLRVLQNKEFERVGGRSTLRSDFRLLAATNRDLREDVKTGKFREDLYYRLNVLSLK
IPPLRERKEDIPLLVDYFLDRHAKNLGKPRGAVTPEDLDKLVAYDWPGNVRELENVIERS
AILSSGARLEIPDLFQSGASFALDREALSLEENERRHILWALKKTGGKVRGPGGAAELLE
INHNTLFSRIKKLGIKRK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacctgaatacgccgtcctctttctccacgctcgacgaccatggtctgctgagc
ctcatggccatgttcgaggataacttctccgtagactggatcctggaaatgtccggcctg
aaagccagcgaaatcctccaggagctggacggactctttgaaaaaaaaatcctccagaag
gaaggccccggcgtctattccttcagaaacgaggcccaaagaaaaaaaatcgcccagtcc
gttccccaggcggaaaaggagctctggcaccgctccatcgcggggatttacttccgggag
atgcaaagccaggacgaggctgttctggcggcttccagccacctgattcatttgaaaaac
ggcgagcaggaatgcaaagtcctcatgaaggccggggacatttaccggaagacccaccgc
caccaaaaggcgcttcaatgctaccagaaaatcatcgacgacctggaaatgtccacctcc
tcccaggcgtacgagctcttcaccaatgcggttatcgccgtctccaagatcgtggagctg
gcgccggacgtggaagccacggtgcccccgctcaaaaccgcggtgcaaaaggcccgcgac
cggaaggacgacgcccatacggcgcttctggaaatgcacttggcgaaaaacgagtggttt
tgctcccacttcaaccaggccatgcgccactttaatcgcggctgggccctggcggagaag
atcgacgaccccaccctgaaaagatccgcggtttttttaagcaccttttttctgtacgcc
cagggcaggcttcgggaggtgatccgcaactacgaggaggtggtctcggacatcgacaag
tatcccagaggccgctttcccatgctgtccgcccaggtggtgggggtctgctatgcattc
aacggccagatcaagcggggcatgggcctcatggacgccatttatgaaaaatgccgcagc
gtgggggatttatacgtgggcagctacgtgggctaccatatcggcagcctgctcatagaa
ctggggcagtacgaagaggccatctactacctggacctggccctggaccatgctctccag
accaacaacacctataactccatcctcatcagcctgaacctggccctggcccattttcgc
aaccacaatcaaaaggaagcggtttcgtatttgagcgaggccgtgcgggtcacccgggag
aggggcattaaaatagaaacccatatttatcaaaacgccgaaatgttctgggccatggag
cagggccagctcccggcggtccaggcggccctggccatggaggatctcaaggaatggcag
aagagccggaacatccttattaaagggggagcgtaccggtatcaggcccttttggaggaa
aaacggggtgtggagaccagcaaggtcctccggtccatgaagctctcggaaaaatggctg
gaggagtccggccacgagattcagctcgcccggacccgcatggaaatggcccgcctgtac
ctgtccatgggccaggaaaaaaaagccaaaggcgccatgcagaaaagcgccgagctattg
gactcctttctccacgatcaggttcccgacaacctgcgattcctcttaaaagacctgcgc
acggataaaaacctgctggaggaaatcatgaagctggggcaggagctggccaccatccgg
aacgaccgggacctggtgcgtcatattcttgccactgtcaatcgcattacaggcgccgag
cggggcgcggtctttctggtcaacaaggagacaggcaagcccgccgtggtccttagggcc
gcccggaacatcatggagcaggacatatcccggcccgaatttcaatccagcatgaaaatg
gtgcgggaagccgcctttacgggccgcgcccggtttcgcctcaccgaagcgccgcgccag
tcccaccccctggagaataaagtggtccactcgtgcatttgcgttcccatgaaattccgg
gagacggtcctgggggtgttgtacgtggacaaccggattttccccagcgccctgaaggaa
tcggacatccgcattctggattttttctcctcccaggccgccatcgcgctggataacgca
cggattcacgaacaaaacagagctcttatccgcaaactggaggaggaaaagcggtatctg
gaggaacagcagagcgagtttcagcctcccgtggaatttgtgggcgagtgcgcggccgtg
cgcaaggttttgaatgacgtaaaaaaaattgcggccacggactccaccgtcctgattttg
ggggaaaccggcgtgggcaaggagttgatctcaacagccatccacgaaagaagctccaga
gccggcaaaccattcatccgcgtcaactgcagcatgtttccggaagggctcatagccagc
gagttgttcgggcacgaaaaaggcgctttcaccggtgcggacaaaaggcgcctgggcagg
ttcgaattggcggacggaggcaccctgtttttggacgaaatcggcgacatttcccatgaa
gtccaggtccggctgctgcgggtccttcagaacaaagaatttgaacgggtgggcggaaga
agcaccctgcgctcggacttcaggctgctggcggccaccaaccgggatttgcgggaggac
gtgaaaaccggaaaattccgggaagacctgtactatcgcctcaatgttttaagccttaag
attcctcccctgagggagcgcaaggaagacatacctctccttgtggactattttctggat
cggcacgccaagaacctgggaaagccccggggcgccgtcacgccggaggatctggacaag
ctggtggcctatgactggcccggcaatgtgcgggagttggaaaacgtcatcgaaagaagc
gcaatcctgagctccggcgcccgtctggaaatcccggatctcttccaaagcggcgcttcc
ttcgctctggaccgggaagccctatccctggaggaaaacgaacgccgtcatattttatgg
gccttaaaaaagaccggcggcaaggtgcgcggcccgggaggcgccgcggaactgctggaa
atcaatcacaacaccttgttttcacgcatcaaaaaactgggaatcaagagaaagtaa
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