Desulfatibacillum aliphaticivorans: Dalk_3998
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Entry
Dalk_3998 CDS
T00813
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dalk_3998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dal03400
]
Dalk_3998
DNA repair and recombination proteins [BR:
dal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dalk_3998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_22
AAA_14
AAA_27
Rad17
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACL05684
UniProt:
B8FJL5
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Position
complement(5030501..5033170)
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AA seq
889 aa
AA seq
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MSAPKVTPMVRQYLSIKAEHPDSILFFRMGDFYEMFFEDAEKASKALDITLTSRNKNDPD
PVPMCGVPHHSANGYVARLVEQGFKVAICDQVQDPSEAKGLVERKVVQVVTPGMQLDGRY
LDASQNNFVCAAVTGRGGVGLAFLDISTGAFLVTQVTTPESAFQEILRMGPKELVLPEKF
EENARAAAAMRMADQLPTSRLEGKDFENARTRDRLLEHFKTRSLEGFGIQDLPLAVRAAG
ALLHYVQQAQRQEITHVTKIQAYFQDQFLWIDDNSARNLELLKNIRNGTRQGALISVLDK
TVTAMGARLMSYLLRYPLIDPQVINLRLDAVEQAKDLARVRDEVREALKEVHDLERLRSR
TALGHANGRDLAAMGESLKQLPRLWALLKENFESPLLCGEATDDGLTDVADLIDRSIRED
APPGVRDGGMIKPGFNEELDEVAALATDVKGLIAGLEAQEKERTGISTLKVRYNKVFGYY
IEISKNQTKSIPPHYVRKQTLVNAERYITDELKEFETKVLGAEERRVALEYNIFTQIVDR
INGENDRLEKASHLIAWVDVLAALGHVADHNGYCRPVVDMGQTLDLQESRHPVVEKMLPG
QRFVPNNIAMNNLDQQILMITGPNMAGKSTVLRQAALCVIMAQMGSFVPAEKAVVGVVDK
IFTRVGALDNLSQGESTFMVEMQETANILNNVSHRSLVILDEIGRGTSTFDGLSIAWAVA
EYLHDYKDHGVKTMFATHYHELTDLTKTHPRVKNFNIAVNEWNDEIIFLHSLVEGGTNKS
YGIQVARLAGIPASVIRRSKQVLQTIEDSEEARVAYSAKASGKSGKKDVQVQMSLFPTPG
ELAAQALERMDINVMTPLEAMNVLSELQQRVKRPEKAPADVTAETEDQE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccaaaagtaactcccatggtacgccagtacctatccattaaggcggaacat
cctgattcaattctatttttcaggatgggcgatttctacgaaatgttcttcgaggatgcc
gagaaagcctccaaggcgctcgacatcaccttaacttcccggaataaaaacgacccggac
cccgtacccatgtgcggggtcccacatcattctgcaaacggatatgtggcccggctggtg
gagcagggcttcaaggtggccatttgcgatcaggtgcaggacccttccgaagccaaaggc
ctggtggagcggaaagtggttcaggtggttacgcccggtatgcagctggacggcagatac
ctggacgccagccagaataatttcgtatgcgccgccgtcaccggcaggggaggcgttggc
cttgcctttctggacatctccacgggcgcttttctggtcacccaggtgaccacgcccgaa
tccgcgtttcaggaaatcctccgcatgggccccaaggaactggtcctgccggagaaattc
gaagaaaacgcccgggccgccgcagccatgcgcatggcggaccagttgcccacttcccgc
ttggaaggcaaggactttgagaacgccaggaccagggacaggctgctggagcactttaaa
acccggtctttggaaggattcggcatacaggacctgcccctggccgtcagggcggccggt
gccttgctgcattacgtgcagcaggcccaaaggcaggaaatcacccatgtcacgaagatc
caggcctactttcaggaccagttcctgtggatagacgataacagcgcccgaaacctggag
ttgctgaaaaacatacgcaacggaacccgccagggcgcgctcatctccgtgctggataaa
accgtcaccgccatgggcgcaaggctcatgagctatttgttgcgctatcctttgatcgat
ccccaggtcataaatttgcgtctggacgccgtggaacaggcaaaagacctggcccgggtg
cgggacgaggtcagggaagcgcttaaagaggtgcacgacctggagcggctgcgcagccgg
acggccttggggcacgccaacggacgggatctggccgccatgggcgagtctctcaagcaa
ttgcccaggctgtgggctttgcttaaggagaattttgaatcccccctgctttgcggagag
gcgacggacgacggcctgaccgacgtagccgacctcatcgaccggtccatccgcgaggat
gcgcccccgggtgtgcgggacggcggcatgatcaagccgggcttcaacgaggagttggac
gaggtggcggccctggccacggatgtcaaagggcttatcgccgggctggaggcccaggaa
aaggaacgcacgggcatatccaccttaaaagtccgctacaacaaggttttcggctattat
attgaaatatccaaaaaccagaccaagtcgattccgccccattacgtgcgcaagcagacc
ctggtgaacgccgaacgctatattacggacgaactcaaggaatttgaaaccaaggtcctg
ggcgccgaagaacgccgggtggccctggaatacaatattttcacccagattgtggaccgc
atcaacggggaaaacgaccggcttgaaaaggcatcgcacctgatcgcctgggtggatgtc
ctggccgccctgggacacgtggccgaccataacgggtattgccgcccggtggtggacatg
ggccagaccctggacctgcaggaaagccgccatcccgtggtggaaaaaatgctgcccggc
cagcggtttgtgcccaacaacatagccatgaacaatctggatcagcagatcctcatgatt
acgggtcccaacatggccggtaaatccacggtgctcaggcaggccgccttgtgcgtgatc
atggcccagatgggctcgttcgttccggctgaaaaagccgtggtgggcgtggtggacaaa
attttcaccagggtgggggctttggacaacctctcccagggcgagagcacctttatggtg
gaaatgcaggaaaccgccaacatcctgaacaacgtgagccaccgaagcctggtgatcctg
gacgaaatcgggcggggcacctccacctttgacgggctgtcaatcgcctgggccgtggcc
gagtatctgcatgactataaggaccatggcgtaaaaaccatgttcgccacccattatcac
gagttgaccgacctgaccaaaacccatcccagggtgaaaaacttcaacattgcggtcaac
gaatggaacgacgaaattattttcttgcacagccttgtggaaggcggaaccaacaagagt
tatggaattcaggtggcaagactggcgggaatacccgcaagtgtgataagaaggtcaaaa
caggttcttcaaaccattgaagatagcgaagaagccagggtggcctactcggccaaagcc
tccgggaaaagcggcaaaaaagacgttcaggtccaaatgagcctgttccccacccctggc
gagcttgcagcccaggccctggaaagaatggacatcaacgtcatgacccctctggaggcc
atgaatgtgctgagcgagcttcagcaacgggttaaacgcccggaaaaagcccctgcggac
gttacagcggaaaccgaagaccaggaataa
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