Desulfatibacillum aliphaticivorans: Dalk_4043
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Entry
Dalk_4043 CDS
T00813
Name
(GenBank) sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family
Organism
dal
Desulfatibacillum aliphaticivorans
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Pkinase
Sigma54_activ_2
PAS_4
HTH_8
PAS_3
PAS_9
PK_Tyr_Ser-Thr
PAS
AAA_5
AAA
AAA_2
AAA_16
IstB_IS21
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACL05728
UniProt:
B8FLZ5
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Position
complement(5078298..5081057)
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AA seq
919 aa
AA seq
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MVSLEGFDGLEKTGEGPVFTLYHGVRTADGKPAVIKHIPPGKLSPSEAAHINDEYQRISG
MRSEHAVPLLEFKRLSGPEGDGFLFAFERLGGTPLLDYFRSLPFNLTVFLEKALDLVQGV
SDMHRAGLTHKELRPAAVMAEARTGRVVICEYPFSCLLSREDFRIFSRDILDLRMPYAAP
EQFGGRMNRWIDYRSDYYSLGALFYEILGGAPPFQYDDPVRMVLAHGYEEPVYLGDLNSS
IPEALCRIVMKLLEKKPGDRYQSGDGLMHDLRICLSHLQEKGEIQPFVLGKKDKPEDFRF
SQPGFGRDVEAREHLSHWEAAPKARDVEEARAAMLELYQKYQTHVENTGEIIWTTNMNLT
PTYISPSSERILGYTPEELFLHYNPALLTQDSVERLLEVRNERMENPEDFFRPFSIDFEI
IHKNGSIRLCETQVSFLQDEQGAPSGIIGISRDVTDQRSAEKALQEKEAQLTAIVGAFEG
FIYIASPDYTLHYLNDRMMEWIGRDASGETCHQAIHNRATPCPWCAMGRVTKGETVRSEM
QFGKDLRWYYSLNSPARQASGGVFQQSILMDVTERKRREQALQETEKTLRQENLRLKSSM
RERYKFGDIVGKSLPMQNVYELILKASESDANVIIYGESGTGKELAARAIHAMSARSKGR
FVAVNCGAIPGQIMESEFFGYKKGAFTGAYADKAGYLEQARGGTLFLDEIGEIDLNLQVK
LLRVIEGRGFTPVGGGEEKDTDIRIIAATNRDLAASVKKGLIREDFYYRIHIIPIHLPPL
RRRKEDILLLIDHFLREFGGDSQASPLPGHVMEALLNHHWPGNVRELQNVLQRYVTLKKL
DLSGLSHDKDQGGRAPQPPAEIALRGEETWNLFKAAAGFERQFISQALEREKWRKGRTAD
LLGISRRTLFKKMKDLGID
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctcgaaggtttcgacggattggaaaaaaccggtgaagggcctgttttcacc
ctgtatcacggggtgcgtacggccgacggcaagccggcggtcatcaagcatattcctccg
ggcaagctctctccttccgaggcggcccatattaatgatgaataccagcgcatcagcggc
atgcgttctgagcacgcggttccgcttttggaattcaaacgcctgtccgggccggagggg
gacggttttttgttcgcgttcgaacgcctgggggggacgcccctgctggactattttcga
agccttccttttaatttgaccgtctttctggaaaaagccctggacctggtgcagggggtg
agcgacatgcaccgggccggactgacgcacaaggaattgcgtcccgccgccgtcatggcg
gaggcgcggaccggcagggtcgttatctgcgaatatccattctcctgtttgctcagccgg
gaggatttccggatattttccagggacatcctggacctccgcatgccctacgcggcgccc
gagcagttcggaggccgcatgaaccggtggatcgactaccggtccgactattacagcctt
ggggctctgttttacgaaattttgggcggcgcgccgccttttcaatacgacgatcccgtg
aggatggtgctggctcatgggtatgaggaaccggtttatctgggcgatttgaattcctct
attcccgaggcgctttgccggattgtcatgaagctgctggagaaaaagcccggagaccgc
tatcagagcggggacggcctcatgcatgatttgaggatctgcttgtctcacttacaggaa
aagggcgagatccagccttttgttttggggaagaaggacaagcccgaggatttcaggttc
agtcagccgggcttcggccgggacgtggaggccagggagcacctcagccattgggaggct
gcgcccaaggccagggacgtggaagaggccagggcggccatgctggagttgtatcagaaa
taccaaacccacgtggagaacaccggggagattatctggaccacgaacatgaacctgacg
cccacctatatcagtccttccagcgagcggattttgggctacacccccgaggagctgttt
ctgcactacaacccggcccttttgacccaggattcggtggagcggcttttggaggtgcgc
aacgagcgtatggagaacccggaggattttttccggcccttttccatagattttgaaatc
atccataaaaacggctccatccgcctttgcgaaacccaggtgagttttttgcaggacgag
caaggggcgccgtcaggcatcatcggcatatcccgggacgtgacggaccagcggagcgcg
gaaaaggcgctgcaggaaaaggaagcccagttgaccgccattgtaggcgctttcgagggc
ttcatttatatagcctccccggattacaccctgcattaccttaacgaccgcatgatggaa
tggatcggccgggacgcctctggggaaacctgccaccaggccatccacaaccgggcgacg
ccctgcccctggtgcgccatggggcgggttaccaaaggcgagaccgtgcgttcggaaatg
cagttcggaaaagacctccgctggtattattccctcaactcccccgcgcgtcaggcctcc
gggggcgtcttccagcaatccattttaatggacgtgaccgagcgcaaacgccgggagcag
gccctgcaggaaacggaaaagaccctgcgccaggaaaacctgcgccttaaatcctccatg
cgggagcgctataaattcggcgacatcgtgggcaaaagcctgcccatgcagaatgtgtac
gagctcattttaaaagcctcggagtccgacgccaacgtgattatttacggggagtccggc
accggcaaggagttggccgcccgggccatccacgccatgagcgcccggagcaaggggcgt
ttcgtggccgtcaactgcggcgccatccccgggcagatcatggaaagcgagtttttcggg
tataaaaaaggcgctttcaccggcgcctatgcagacaaagccggatacctggagcaagcc
cggggcggaaccctgttcctggacgaaatcggcgagatcgatctgaatttgcaggtaaag
ctgctgcgggtgatcgaaggccggggcttcacccccgtgggcgggggcgaggaaaaagac
acggacatccgcatcatcgccgccaccaaccgggacttggccgcctctgtaaaaaaaggc
ctgatccgggaggatttttactatcggattcacatcatccccatccatctgccgcccttg
cgccgccgcaaggaggacatcctgcttttgatcgaccacttcctgcgggagttcggcggg
gacagccaggcttcccccctgcccgggcacgtgatggaagcgctgttaaaccaccattgg
cccggcaacgtgcgggaactgcagaacgttctccagcgctacgtcaccttgaaaaagctg
gacctctccggcctgtcccatgacaaggaccagggagggcgcgctccccagccccccgct
gaaatcgccctccggggggaggagacctggaacctgttcaaggctgcggccgggtttgaa
aggcagtttatcagccaggctttggagcgggagaagtggcgcaagggccggaccgcggat
ttattggggatcagccggcggaccttatttaagaagatgaaggatcttgggattgattaa
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