Desulfatibacillum aliphaticivorans: Dalk_4242
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Entry
Dalk_4242 CDS
T00813
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dalk_4242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dal03019
]
Dalk_4242
03110 Chaperones and folding catalysts [BR:
dal03110
]
Dalk_4242
03029 Mitochondrial biogenesis [BR:
dal03029
]
Dalk_4242
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dal04147
]
Dalk_4242
Enzymes [BR:
dal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Dalk_4242
Messenger RNA biogenesis [BR:
dal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Dalk_4242
Chaperones and folding catalysts [BR:
dal03110
]
Heat shock proteins
HSP60 / Chaperonin
Dalk_4242
Mitochondrial biogenesis [BR:
dal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Dalk_4242
Exosome [BR:
dal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Dalk_4242
Exosomal proteins of other body fluids (saliva and urine)
Dalk_4242
Exosomal proteins of breast cancer cells
Dalk_4242
Exosomal proteins of colorectal cancer cells
Dalk_4242
Exosomal proteins of bladder cancer cells
Dalk_4242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACL05924
UniProt:
B8FM86
LinkDB
All DBs
Position
complement(5330580..5332226)
Genome browser
AA seq
548 aa
AA seq
DB search
MAKEIKYDMKARELMLAGVNALADAVAVTHGPKGRNVVIDKAWGAPTVTKDGVTVAKEIE
LENKFENMGAQMVKEVASKTSDTAGDGTTTATVLARAIYEEGMKLVVAGNNPMAIKRGID
KACEAAVKSLMNLSKPTKEQREIAQVGTISANTDETIGNIIAEAMNKVGKEGVITVEEAK
SMDTTLDVVEGMQFDRGYISPYFVTDSEKMVCSLEDPYILIHEKKISNMKDLLPLLEQTA
KMGKPLLIVAEDVEGEALATLVVNRLRGTLQIAAVKAPGFGDRRKAMLEDIAILTGGTVV
SEDMGIKLENMSLADLGKCKRVSIDKDNTTIVDGAGARSALEGRVKQIRAQIDDTTSDYD
REKLQERLAKLIGGVAVINVGAATEVEMKEKKARVEDALNATRAAVEEGIVPGGGVALVR
AIDAVAKAKITGEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEGSFGYNADT
DTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAMIADKPDENAGGMPAMPGGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaatatgatatgaaagccagggagcttatgctcgctggagtcaat
gctcttgctgacgccgtagccgtcacccacggccccaagggccgcaatgtggttattgac
aaagcctggggcgctcccacggtgaccaaagacggcgtgaccgtggccaaggaaatcgaa
ctggaaaacaagttcgagaacatgggcgctcagatggttaaggaagtggcttccaagacc
agcgacaccgccggcgacggaaccaccaccgccaccgtgcttgctcgcgccatttacgaa
gaaggcatgaagctggtcgtggcgggcaacaaccccatggccatcaaacgcggcattgac
aaggcttgcgaagcggccgtcaaatccctgatgaatctttccaagcccaccaaggaacag
cgcgaaatcgcccaggtcggcaccatctccgccaacaccgacgagaccatcggcaacatc
atcgccgaggccatgaacaaggtcggcaaagaaggcgtcatcacggtggaagaagccaaa
tccatggacaccaccctggacgtcgtggaaggcatgcagttcgaccgcggttacatttcc
ccttactttgtgaccgattccgaaaaaatggtgtgctccctggaagatccttacatcctg
atccacgagaaaaaaatctccaacatgaaggacctgctgcccctgctggaacaaaccgca
aaaatgggcaagcccctcctgatcgttgctgaagacgtggaaggcgaagcactggccact
ttggtcgtcaacaggctccgcggcaccctgcagattgcagccgttaaggctcccggcttc
ggcgaccgccgcaaggccatgctcgaagacatcgccatcctcaccggcggcaccgtggtt
tctgaagacatgggcatcaagctggaaaacatgtccctggccgacctcggcaaatgcaaa
cgcgtaagcattgacaaagacaacaccaccatcgttgacggcgcaggcgcccgcagcgcc
ctggaaggccgcgtcaaacagatccgcgctcagatcgacgacaccacctccgattacgac
cgcgagaagctgcaggaacgtctggccaagctgatcggcggcgtggccgtcattaacgtc
ggcgcagccaccgaagtggaaatgaaagaaaagaaagcccgcgtggaagacgccctgaac
gccacccgcgcagcggttgaagaaggcatcgttcccggcggcggcgtggctctggttcgc
gccattgacgccgtggccaaagcgaaaatcaccggcgagcagaaaattggcgcccgcgtg
gttatgcgcgctctggaagctcctcttcgcatgatcgccaacaacgccggcatggaaggc
tccgtggttctggacaaggtcaagaacaccgaaggctcctttggttacaatgccgacacc
gacacctacgaagacctgattgaagccggcgtcatcgaccccaccaaggtggtccgccta
gctctgcagaacgcctgcagcatcgccggcctcatgctcaccaccgaagccatgatcgcc
gacaagccggacgaaaatgccggcggcatgcccgcaatgcccggcggcggaatgggcggc
atgggcggaatgggcggaatgatgtaa
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