Desulfatibacillum aliphaticivorans: Dalk_4743
Help
Entry
Dalk_4743 CDS
T00813
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dal
Desulfatibacillum aliphaticivorans
Pathway
dal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dalk_4743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dal03019
]
Dalk_4743
03016 Transfer RNA biogenesis [BR:
dal03016
]
Dalk_4743
Enzymes [BR:
dal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Dalk_4743
Messenger RNA biogenesis [BR:
dal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dalk_4743
Transfer RNA biogenesis [BR:
dal03016
]
Prokaryotic type
tRNA degradation factors
Dalk_4743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ACL06421
UniProt:
B8FCZ0
LinkDB
All DBs
Position
5858491..5860629
Genome browser
AA seq
712 aa
AA seq
DB search
MEVTLERNLGDKPLRIQTGKLAKQASGSVVVSYGETITLVTVVGSQELRPGIDFVPLSVE
YQEKVYAAGRIPGNYFRREIGRPSEKETLTARLIDRPIRPLFPKTWRYETQVIATVLSMD
QENDPDMLSMVGASAALCISDLPFFTPIACVRVGRIDGELVANPTISQQENCDLNIIVAG
SRDGVVMVEGGGQFISEEEMLDAIYFGQESLEPLLEMQEELMEKAGVPKRSADPVEKDEY
LAAKVAELADPEIKKALEINDKLERQDAIRDVKKTVMEGLGEEYEDRGKEVSEFIHDRTR
VIMRAMVLDEGRRIGGRRFDEVRPITCEVGILPRTHGSALFTRGETQSLGILTLGSSGDE
QRVETLYGDETRPFMLHYNFPPYSVREVKRISGPSRRDIGHGGLSTRAIKEVLPSKEDFD
YTIRIVSEILESNGSSSMATVCSASLALMDGGVPITNPVSGIAMGLMAEGDKIVVLSDIL
GDEDHMGDMDFKVAGTKDGITSVQMDIKISSLTREIMEKALAQARVGRLHILEKMLTTIS
ESREEMSPYAPKVFTIQIHPDKIRDIIGPGGKVIRAIQAETGTRVDVDDSGLVKVSAVNL
EEGEAALQMIKDITAVPEVGAVYEGTVVKIMDFGAFVAILPGTEGLCHISQLDTKHVKKV
SDVVKEGEKIKVKVLELTKDGKIRLSRKALLEEENGKSGPENGAPQRDKNRH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaacactagaaaggaatttgggggacaagcccctgcgtattcaaacaggcaag
ctggccaaacaggctagcgggtcggttgtggtttcgtatggcgaaactatcacgttagta
accgtggtgggttctcaggaactccgcccaggcattgattttgttccgctatcagttgag
taccaggagaaggtgtatgccgccggaagaattcccggaaactattttcgccgggaaatc
gggcggccctcagaaaaagaaaccctaacagcaagacttatagacaggcccatccggccc
ttgtttcccaagacctggcgttatgaaacccaggtgatagccaccgtgctgtccatggat
caggaaaacgacccggatatgttgtctatggtaggggcttccgccgcactttgcatttcc
gacctgccctttttcacgcctatcgcctgcgtcagggtaggcagaatcgacggcgaactg
gtggcaaaccccactatcagccagcaggaaaattgcgatctcaacatcatcgtggcaggc
tcccgggacggggttgtcatggtggaaggcggaggccaatttatttctgaagaagaaatg
ctggacgccatttattttggacaggaatccctggagcccctccttgagatgcaggaagaa
ctcatggagaaggcgggcgtccccaaaagatcggccgatcctgtagaaaaggacgaatac
ctggccgccaaagtggctgagctggctgatcccgagatcaaaaaggctcttgaaatcaac
gataagctggagcgtcaggacgccattcgcgacgtcaagaaaaccgtcatggaaggcctg
ggcgaggaatacgaagaccggggcaaagaagtttcggaattcatccatgaccgcacccgc
gtgattatgcgcgccatggtgttggacgaaggccgccgcatcggcggacggcgctttgac
gaagtccggcccattacgtgcgaagtgggcattctgccccggactcatggctccgccctg
tttacccgcggagaaacccagtccctgggcatcctcactttagggtcctccggcgatgaa
cagcgtgtggaaaccctgtacggcgacgaaacccggcccttcatgctccactataacttt
cctccttactccgtgcgcgaggtcaaaagaatcagcggccccagccggagggatatcggc
cacggcggcttgtccacccgcgccatcaaggaagtgcttccttccaaggaggattttgac
tacacaatccggatcgtttccgaaatcctggaatccaacggctcctcctccatggccacg
gtttgctccgcaagcctggcgctcatggacggcggcgtgcccattaccaatcccgtctcc
ggcatcgccatggggctgatggccgaaggcgacaagattgtggttctctccgatattctg
ggggatgaggaccacatgggcgacatggacttcaaggtggccggaaccaaggacggcatc
acctccgtgcagatggacatcaagatttccagcctcacccgggaaatcatggaaaaagcc
ctggcccaggccagagtgggacgtttgcacatcctggaaaaaatgctgaccaccatcagc
gaatcccgggaggaaatgtctccttacgcgcccaaggtgttcaccatccagatccatcct
gacaaaatccgggacatcatcggcccaggcggcaaggtgatccgggctatccaggcggaa
accggaacccgcgtcgacgtggacgacagcggcctggtcaaggtctctgcggtgaacctg
gaagaaggcgaagcagcccttcagatgatcaaggacattacggccgttcccgaagtgggc
gccgtctacgaaggaaccgtcgtgaagatcatggacttcggcgcctttgtggctatcctc
cccggcacggaaggtctgtgccatatttcccaactggataccaagcacgtcaaaaaggtg
tccgacgtggtaaaggaaggggaaaagatcaaggtcaaggtgctggaattaaccaaggat
ggaaagatccgtctgagccgcaaggcgctcctggaagaagagaatggaaaatccggtccg
gaaaacggagctccacaacgggataagaatcgtcactaa
DBGET
integrated database retrieval system
