Dermacentor albipictus (winter tick): 135895738
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Entry
135895738 CDS
T11267
Symbol
HBS1
Name
(RefSeq) uncharacterized protein HBS1 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135895738 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135895738 (HBS1)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135895738 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135895738
NCBI-ProteinID:
XP_065279958
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Position
6:complement(44174543..44218829)
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AA seq
1163 aa
AA seq
DB search
MSRHRNVRTMNYDDDYEGYYDVYGRSQEEDSCISPTTEEQFLYNRDKLHSMSSFLSPEVL
QEENEEDDEEEDGAHKAGPREPELSPVDEVRLYECIEKMQNVVGDSIPEATLRRVALEGD
FNAEVALDRLLQETDKPKPQREPRKRESDSDDDDSCVISPSDTVFDGGGASAMVPLNLRT
VVAHFDVPSKPRSDSTRRLDGGEHGVRAAVGWVELPTTGTESAAPSKFALASSPSMCTVE
TLGCELKLGDLLKSSGSGETRRTDSLSKAAHSISGCDGALPVLAHLDCETVPSSSLTHAS
SATYDLSPNPQSCDTDAVDDFLETLLQEENVPSVTSQRKPTVQASGGVPDELDVLLGMVS
SYKPSAATSTDTSRDGGRTTSARASHEALSLGKRTKDLVGDSLDALLGIGADSAAPEHGG
KGAPKMDFDDFLMSLRSDIGGTSDLKAQDDDLALLPIADILSVASSDDKGPGKSPQKSDS
KQPALLNLGEILGLNRERAPDSAAESGALKLDDILKGATGGPVAAGQENCPYGNNGESPE
PSPLHSAAAVAVKEVSLFGKVLVYFHFVRRQKSVFDLTSWLRKLGLLEPRPGEKLRTAAF
GFGVPSPDDIVRACRKRAVEASERKPLTPLEQVGAPVRAAGANKELLPAVDPALRQTFPR
QSQPDVEDRRSKASSETLKVPSTTSSNRSSPDLDRKEPSPEAAGDTQPADGATPKTPRSK
PPKDVAAEYAKERGSTKSLLNLVVIGHVDAGKSTLMGHLLYRLGCVQKKQMHKYEQESKK
LGKASFMYAWVLDETSEERNRGITMDVAQAKFETPNRSIVLLDAPGHRDFIPNMITGAAQ
ADVAILVVDATRGEFETGFETGGQTREHTLLVRSLGVSQLAVAINKLDNVSWDEGRYNEI
TAKLRTFLRQAGYRESDFTFVPCSGLTGENLTTKPESSSPLTKWYTGPCLVDVIDSFKPP
ERPVSKPFRLCVSDVFKGQGSGFCVSGRIDAGCAANGDKVLVMPAAEQGTVKGITIDELP
VTQAFAGDQVALTLAGVDMIKVTTGSFLCDPTVPIRVSTRFQARLVVFNVEVPLTRGFPV
VLHYQSTTEQASIHRILSQLNKVTGEVVRNKPRCLVKNTSGLVEIKVSRPICVELYKEFK
ELGRITLRSGGSTVAAGVITEVM
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcaccgaaatgtccggactatgaattatgatgacgactacgaaggttactac
gatgtctacggcaggtcccaggaagaagactcgtgcatatctccgaccacagaggagcag
ttcctgtacaacagagacaagcttcattccatgtcgtcattcctgtctcctgaagtcctc
caagaggaaaatgaggaggacgatgaagaagaggatggagcccacaaggccggccctcgg
gaacccgaactcagccccgtagacgaagtgaggctttacgagtgcattgagaaaatgcag
aatgtggtgggcgactcgatcccagaggctacgcttcgtcgagtggcgctcgagggagac
ttcaatgcagaagtggctcttgaccgtcttctgcaagaaacggacaagccaaagccgcag
cgagagccccggaaaagagaatcggacagcgatgacgacgactcttgtgtcatttcgccg
tccgacactgtgtttgatggtggtggggcgtcagcgatggtcccacttaacttgaggacc
gttgttgcgcactttgacgtgccgtcaaaaccccgaagtgatagcacacggaggttggac
ggtggcgaacacggggttagagctgccgtagggtgggtggagctgccgaccacagggaca
gagtcggcagcaccttcaaagtttgcgcttgcttcttctccctccatgtgtacagttgaa
accttaggttgtgaattaaaactgggtgatttgctcaaatctagtgggtctggggaaact
cgtaggacagacagcttatcgaaagctgcgcacagtattagtggttgtgacggtgcattg
cctgtgcttgctcatcttgactgtgaaacagtaccttcatcatcactcacacatgcttca
agcgctacttacgatctcagtcctaaccctcaaagttgtgatacagacgctgttgatgac
tttcttgaaacactgctgcaagaagaaaatgtgccgagtgttacctcgcaacgaaaacct
acggtacaagcatcaggtggagtgcccgatgaactggatgtactgttaggcatggtctcg
agctacaagcccagtgccgccacctcgacagacacttcaagagacggaggccgtactact
tctgcgagagccagtcacgaagcactatctttaggcaaacgtacgaaagatctggttgga
gacagcttagatgcacttctgggaatcggtgcagactctgcggctccagaacacggtggc
aaaggtgcgcccaagatggacttcgacgacttcctcatgtcgttgagaagtgacattggt
ggcacaagcgacttaaaagctcaggatgatgatctggcactgctgcccatcgcagatatt
ttgtctgtggcttccagtgacgacaagggcccagggaagtctccgcagaagtcggactca
aagcagcccgctttgctcaacctcggcgagatacttggcctgaacagggagcgcgcccct
gattcagctgctgaaagtggagccctcaagcttgatgacatcctgaaaggtgccacagga
ggcccagtggccgccggacaagagaactgcccgtatggcaacaacggagagagccccgag
ccgagtcctctgcacagtgcagctgccgtggcggtgaaagaagtgtccctctttggcaaa
gtgcttgtgtacttccattttgtccgccgacagaagtccgtctttgatctcacgagctgg
ttgaggaaacttggtctgctggagccaaggcctggggaaaaattgaggacagcggcgttt
ggtttcggtgtgccgtcaccagacgacattgtgcgcgcgtgtcggaagcgagcagtggag
gcatcagaacggaagccgctcacacctctcgaacaagttggcgcacctgtcagagctgct
ggggccaacaaggagctgctgcctgctgttgacccggcactgaggcagacgtttcccagg
caatctcagcctgacgtcgaggacaggcggagcaaggcatcatcggaaactctcaaggtg
ccgagtaccacaagctccaaccggagttctccagatctggatcgtaaggagccctctcca
gaagctgccggcgacacccagccggccgacggtgccactcccaagacaccaaggtccaag
ccacccaaggacgtggctgcagaatatgccaaggagaggggatcgaccaagtctctcctg
aacctggtggtcattggacacgtagacgctggcaagagcacgcttatgggccacctcctg
tacaggcttggctgtgtacagaagaagcagatgcacaagtacgagcaggagtccaaaaag
ctaggaaaggcttcatttatgtatgcgtgggtattggatgagacgtcagaagagaggaat
cgtgggatcaccatggacgtggctcaggcgaagtttgagacacccaacagaagcattgtc
ctcctagacgcgccgggtcatcgggacttcatcccaaacatgatcacaggtgctgcccaa
gcggacgtggccatcctggtggtcgatgctacacggggtgaattcgaaactggttttgag
acgggagggcagacaagggagcacaccttgctcgtgcggtctctaggtgtgtcgcagctt
gcggtggccatcaacaagctggacaacgtgtcctgggatgaggggcggtacaacgaaatc
acggccaagctgcgcaccttcctgcgccaggctggctatcgggagtccgacttcaccttt
gtgccttgcagcggcctgacgggcgagaatttgaccaccaagcccgagtccagttcaccg
ctcaccaagtggtacacgggaccctgcctcgttgatgttatcgatagcttcaagccacct
gagcggcccgtgtcgaagccgttccggttgtgtgtcagcgatgtcttcaagggccagggc
tctggcttctgtgtgtccggtcggatagacgcaggctgtgcggccaatggtgacaaagtc
cttgtgatgccagcagccgagcagggaactgtaaaaggtatcaccatcgatgaattaccg
gtaactcaggcctttgctggagaccaagtggcattgactctggccggggtcgacatgatc
aaggtcacaacaggaagcttcctctgcgatccgacagtcccaatccgagtgtcgacacgg
ttccaggcacgcctggtggtgttcaacgttgaggtgcccctgacaagaggtttccctgtc
gtgcttcactaccaaagcaccacggagcaggcttccatccatcgcatcctttcgcagctg
aacaaggtcaccggtgaagtggtgcgcaacaagccaaggtgtttagtgaagaacacaagt
ggcctggttgaaatcaaggtgagccgtccgatatgcgtggagctttacaaggagttcaaa
gagcttggccgcatcacgcttcgatcaggtggcagcaccgtggctgctggcgttatcact
gaggtaatgtaa
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