Dermacentor albipictus (winter tick): 135898122
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Entry
135898122 CDS
T11267
Symbol
Cpsf73
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135898122 (Cpsf73)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
135898122 (Cpsf73)
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135898122 (Cpsf73)
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135898122 (Cpsf73)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135898122 (Cpsf73)
U7-dependent histone pre-mRNA processing factors
135898122 (Cpsf73)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Gp58
DUF4457
Motif
Other DBs
NCBI-GeneID:
135898122
NCBI-ProteinID:
XP_065282941
LinkDB
All DBs
Position
3:complement(50199356..50206289)
Genome browser
AA seq
697 aa
AA seq
DB search
MAASMDTPVDSPKRKADSQIPAEESDLLLIRPLGAGQEVGRSCIMLEFKGKRIMLDCGIH
PGMSGLDALPYVDLIEADEIDLLLVSHFHLDHCGALPWFLQKTTFKGRCFMTHATKAIYR
WLLADYIKVSNIGTEQMLYSESDLESSMEKIETINFHEEKDVNGIRFWCYNAGHVLGAAM
FMIEIAGVKVLYTGDFSRQEDRHLMAAEIPNIHPDVLIIESTYGTHIHEKREEREARFTG
LVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSNHPELHDIPIYYASSLAKKCMAVYQT
YVNAMNERIRRQITINNPFVFKHISNLKSIEHFEDIGPCVVMASPGMMQSGLSRELFESW
CTDPKNGVIIAGYCVEGTLAKTILSEPEEITTMVGQKLPLKMSVDYISFSAHTDYQQTSE
FIRTLKPPHIVLVHGEQNEMGRLKAAIVREYEDDLETRIEVHNPRNTQAVELHFRGEKTA
KVMGSLAVQPPEPGHPLSGVLVKRNFSYHLLAPTDLGKYTDMVMSTVGQRMSISYTGSFQ
MLHFFLNQLSGDVEIVEGSKKALRVFGKVTIVQESPSMVVLEWNSSPVNDLFADAVITVV
LRAQCSAVPAKSLPSTLVKVDRMHFTECLMETLAEMFGEDSVGKVVKGERMMVTVNDRCA
HINLRSLEVQCEGDDVLQQIVSTAVTKLYNSMAPLKV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctctatggacacgccggtggacagcccgaagagaaaagcagattctcaaatt
cctgctgaggaaagtgacctactgttaatacgaccgctcggtgccggccaagaagtaggg
aggtcatgcattatgcttgaatttaagggcaagcgtataatgctggactgcggcatacac
cccggcatgtccggcttggatgcgttgccttatgttgatctcattgaggctgatgaaatt
gacctgctacttgtgagccatttccacttagatcattgtggcgcactgccttggtttttg
caaaagaccactttcaaaggtcgctgcttcatgacgcatgccacgaaggctatctaccgg
tggctgctcgcagactacatcaaagtgagcaacatcggcaccgagcaaatgctttactcc
gaatcggacctggaatcgagcatggagaagattgaaacaattaactttcatgaagaaaag
gacgtgaacgggatccgcttctggtgttacaacgcgggccacgttttgggagctgcaatg
ttcatgatagaaatcgccggtgtcaaggtgctttacactggtgacttctcgaggcaggag
gatcggcacttgatggctgccgaaataccgaacattcacccagacgtgctcatcatcgag
tccacgtatggcactcacattcacgagaaacgtgaggagcgggaagctcgctttacgggt
cttgtgcacgatatcgtcaaccgtggcggtcgctgcctcatacctgtgttcgccctgggt
agagcacaagagcttcttctcatcttggatgagtactggtccaaccacccagagcttcac
gacattcccatctactacgcgtcatcgctggccaagaagtgcatggccgtctatcagacg
tacgtaaacgccatgaacgagcgcatccgacgccagatcaccatcaacaacccgttcgtg
ttcaagcacatttcaaacttgaagagtattgagcactttgaggacatcgggccgtgcgtc
gttatggcgagcccgggaatgatgcagagcggcctgtctcgtgagcttttcgagagctgg
tgtacggacccgaagaatggcgtaatcatcgcaggttactgcgtcgaaggaactctggcc
aaaactattctctccgagcctgaagagattaccactatggtgggccagaagctgccactc
aagatgagtgtggactacatctcgttctcagcacacactgactaccagcagacaagcgag
tttattcggacactgaaaccgccgcacatcgttctcgtgcatggagaacagaatgagatg
ggacgtttgaaggcggccatcgttcgcgagtacgaggatgatttggagacacgcattgag
gtgcacaacccacgcaacacgcaagctgttgaacttcacttccgtggtgaaaagactgcg
aaggtgatgggctcacttgctgtgcagccgcctgagccaggacatccgctttcaggtgtg
ttggtcaaacggaacttcagttaccacctactggctccaactgaccttggcaagtacacg
gacatggtcatgagcaccgtggggcagcgaatgagcattagctacacaggttctttccag
atgcttcacttttttctgaatcagctatctggggacgttgaaatcgtggaaggttcgaaa
aaggcattgcgtgtgtttggaaaagtgacaatcgtccaagagtctccgagcatggtcgtt
ctggagtggaactctagtcctgtcaacgacctgtttgcagatgctgtcatcacagttgtg
ctgcgtgcacagtgttcagcggttcctgccaaaagcctgccttccaccctggtgaaggtt
gaccgcatgcatttcacagagtgcctcatggagacattggctgaaatgtttggcgaagac
tctgtgggtaaagtggtcaagggggaacgtatgatggtcactgtcaatgacaggtgtgca
cacattaacttgaggagccttgaggttcaatgtgaaggagatgacgttttgcaacagatt
gtctcaacagcagtcacaaagttgtacaactccatggcgccacttaaggtgtga
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