Dermacentor albipictus (winter tick): 135898312
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Entry
135898312 CDS
T11267
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
dalb Dermacentor albipictus (winter tick)
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dalb03041
]
135898312
Enzymes [BR:
dalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135898312
Spliceosome [BR:
dalb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
135898312
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
135898312
NCBI-ProteinID:
XP_065283265
LinkDB
All DBs
Position
5:complement(21405397..21514483)
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AA seq
1054 aa
AA seq
DB search
MTRRIAHKLETQWRSQDVLQSEDENATFEEFLLSRQLLGGLHKSGFVRPSPIQLRAIPLG
LCGFDMVVQAKSGTGKTCVFSVLTLQAVNVSKNVVQVLILAPTREIAVQSCDTICCLGCD
MPELRVYAFIGGVPIKEDLQKLTRCHVAVGTLGRLLQLIQQGQLSLEWVRLLVLDEADQL
LGEGFQEDLRKLWASLPERRQVVATSATYPPEVARVLEEELLHKPMVVRLGADTPALLGV
SQWYCLAEGTDEAAWFSRKLRTLDKLLRQMPFSQCLVFLNSQARAQSLEERLRRTGHRAQ
LLSGAQAQSERIKALVCLKAYRCRILVSTDLAARGIDAERVTLVIHFDVAYDLETHLHRS
GRAGRYGTAGQAVTLVTGSQELQQLRTLCAPLGLDIRPLPGFPSLERGSSNIKLNGDVST
NVADEMSAPVVEITSTKVTSLQGNSFKRTGCGIVMALDENSSEETESDIDTALEENSTKE
TGSDIVTSLQEDSFRESSSDIAEMSAQNISKVTCAQLIQLISTNELSSQSGSAEAMPPSV
NTVLPPADNGSRKLLAPTMQQLIYTVESSPESDSKEACAQVMQSSVKVVKLSPTQGVCQV
KKSLLQPMMYSPLKLEEILMGRKVPPRIQPILEWPPDPSIGKELAARIKEEKEAFSKAYG
VVFEPGRSLNIAVAERGSKKTCASSSRDEAIPSHDEHKEAEGTKPVGQFVTADDQSNVNE
KWELSGVSSPVVDIEKVVSSHEKQELKTEEATHVLHSDISACKKTSEGQQEANVQASVSK
DNSRELVDIEKSDSFSLQPQMCSLGLEESKPKERHGAAQANATNDSLKMGADKSSKIAET
MENKRRIVYKSKRKPPSLDPELAVRMKGRTLESGQPQPRSLNISKELRKTILKDASKEND
NVIHQKQKQPKSTSFAGGSDDGNSSVLHIGCVRSSTPSQQWTLYTHSVRPATVDTVYLPP
VTWRHTSAVRLSHLPDSCQPIRTSLCYRCVQKCEAIRATCCREHHSLRTATAASSFPSSL
PQLQVRGAAMDWSRNWFMWHQWYIRRMLQANGYH
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgactcgccgcatagcgcacaagttggagacgcagtggcgctcgcaggacgtacttcaa
tcggaggacgaaaacgctactttcgaagagttcctgctctccagacagctacttggcggc
cttcacaagtcgggctttgtcagaccgtcgcccattcagctgcgtgccatacctctggga
ctctgcggttttgacatggtagtgcaggcaaagtctggcaccggcaagacatgcgtcttc
tctgtgctcaccctgcaagctgtcaacgtatccaagaatgttgtgcaggttctgatcctg
gcgcctacacgtgaaatagcagttcagtcatgtgacacgatttgctgtcttggctgtgac
atgccggagctcagggtgtatgcctttatcgggggtgtgccgataaaagaggacctgcag
aagctgacacgatgccacgtggccgttggcactctggggcggctgctgcagcttatccag
cagggccagctttccctggagtgggtgcgcctcctggtgctggatgaggccgaccagctg
cttggggagggattccaggaagacctcaggaagctgtgggcatcgctaccagagaggcgc
caagtggtggcgactagtgctacctaccccccggaagtggcgcgcgtcctagaagaggag
ctgcttcacaagcccatggttgttcgtctgggagcagacacacctgctctgttgggtgtg
tcgcagtggtactgcttggctgagggcacggacgaggcagcctggttctcgcggaagctg
cgcaccctggacaaactcctgcgtcaaatgcccttctctcagtgcctggtgttcctcaac
tcacaagccagagcgcaatccctggaggagaggcttcgccgcacaggccacagagcacag
ctgctgagcggagcccaggcgcagtctgaacgcatcaaggccctggtgtgcctgaaggcc
taccgctgccgcatccttgtctccaccgacctcgcagctcgtggtattgatgcagaaagg
gtcaccctggtcatccactttgacgtggcgtatgacctggagacgcatctccaccgttct
ggacgggctggccgttacggcacagcaggccaggcagttacattggtgacaggatctcaa
gaactgcagcagcttcgcacactctgtgcaccacttggcttggacataaggccgctgcca
ggttttccaagccttgaacgtgggagtagcaatatcaagctgaatggtgatgtaagcaca
aatgttgcggacgaaatgagtgcgccagtggtagaaataacttcaacaaaagtcacatcc
cttcaaggaaacagcttcaagagaacaggttgtggtattgtcatggcccttgatgagaac
agctctgaggaaacagagtctgatatagacacagcccttgaagaaaacagcaccaaggaa
acaggttctgatattgtcacaagccttcaagaagacagctttagagaaagtagttctgat
attgctgaaatgtccgctcaaaacatttccaaggtaacatgtgcgcagttgatacagtta
ataagcacaaatgaactgtcttctcagagtggttctgcagaggcaatgccaccatcagtg
aacacagtgctgccacctgctgataatggttcgagaaaactgcttgcaccaacaatgcag
cagcttatttacacagttgaatcgtccccagaaagtgattccaaggaagcatgtgcacag
gtaatgcagtcatctgtgaaagtcgtcaaactgtcaccaacgcagggtgtatgtcaagtc
aagaagagtcttctgcagcccatgatgtactctccactgaaacttgaagaaatcctcatg
ggccgcaaggtgcctccacgtatccagcctatccttgagtggccaccagatccttcaata
ggcaaggaactggcagcccgcattaaggaggagaaggaggcattcagcaaagcatacggt
gttgtttttgaacctggcaggtcactgaatattgccgttgctgagcgagggtctaagaag
acttgtgcatcctcttcaagggatgaagcaattcctagccatgacgagcataaagaggca
gagggaacgaaacctgtgggtcagtttgttacagcagatgatcaaagcaatgtgaatgaa
aaatgggagttaagtggcgtttcttcaccggtggtagatatcgaaaaggttgtctctagc
cacgaaaagcaagaactgaaaacagaggaagccacccatgtgctgcactctgatataagt
gcgtgcaagaagaccagcgagggacagcaggaagctaatgtgcaggcttcggtgtctaaa
gataacagcagagagctggtggacattgaaaaatctgatagtttctccttacagccacag
atgtgtagtttaggtcttgaagagagcaagccgaaggaaaggcatggcgctgctcaagca
aatgctaccaatgattctctgaaaatgggtgctgacaaatcaagtaaaatagcagaaacc
atggaaaataagcgtcgaattgtgtacaagtcaaagcgcaaaccaccatcgttggatcca
gagttagcagtaaggatgaaaggtagaacacttgaaagtggccagccacagccaaggtca
ctgaacatcagcaaagaactgagaaaaactattttgaaggatgcatcgaaagagaatgac
aatgtaatccatcaaaaacaaaagcaaccgaagagtaccagttttgctggaggcagtgac
gatgggaacagttcagtgctccatattggatgcgtaagaagcagtacgcccagccaacag
tggacactgtatacacattcagtacgcccagccacagtggacactgtatacctgccgcct
gtgacatggcgtcatacttctgcagtgagactgagtcacctgcccgacagttgccagccc
atcagaacaagcttgtgctacaggtgtgtgcaaaaatgtgaggccatcagggcaacgtgc
tgccgagagcatcactcgctcaggactgccacagcagcgtcctcattcccttcttccttg
ccacagttgcaagttcgtggagctgccatggactggtcacggaattggttcatgtggcac
cagtggtacattaggagaatgctgcaagctaatggctatcattga
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integrated database retrieval system
