Dermacentor albipictus (winter tick): 135898488
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Entry
135898488 CDS
T11267
Symbol
skd
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
dalb
Dermacentor albipictus (winter tick)
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
135898488 (skd)
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
135898488 (skd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
135898488
NCBI-ProteinID:
XP_065283501
LinkDB
All DBs
Position
2:192185448..192344508
Genome browser
AA seq
2434 aa
AA seq
DB search
MNSLMLIGASEKVLPAVHIRIRHEQQVSVCAPLSQADLCGLKWRRLSTEHSSSAVGGSGG
VEPLSEPVLWSFAKCLAADLLCVWRRVARPEQQQHRRELWLFWYGEEPDLTGLVSPELND
TEQGSWENGLSYECRSLLFKALHNLIQRCLLSRGFTRMGKWFLQPCDSSDKDRGGSSGTQ
LSFSFHFFVHGDSTVCASVDVRQHPPIHRISRQHLLAAQSASQSPCKVILGPYGLAGVLT
GQGFKENDVSTQTLLAEWHQFYPLPLLSNSAHRGDATPSTGDEEPLPCALEVLVGGVKLR
YPSSYVFVAESDEVVPGQQTEPSQGTTPATPAPAVASGPFGAAGGTHGSAPPRPHNFPVG
AKPGIPPGLTAVLTPPTSPCEPGYLHSAMMAARTASGATGTSQSSRPVRLAPPEPPMGPH
VAPCALVAQKAKVAAWQDSLLSRACDEEAGAGWDFCDPCGQTHCFCFRCNRGTRPCVATA
TSGTGSMVSRGPSPSPSGGASAKKPGVDKSPAHSSLSSQAKPSRSTTGSNSAPSTPFHRR
SPVPGVDYEGAVALVSRVASGGLPQLSHQPAVGGPPPSVGSCSHPGTPLLLSEGPASQAS
QADPAMPTLSPHPPPRDEPRPSPAPGASPAASGTDSAKDRQPGEQLLSPSSLLEVKPPLE
APPSCSPGGTSHPWGGPSSVPSSSVATPLGSSGVHAPPSVGTEEMPGTPLAAPGGPASLP
PGTPVGGPPGTPAPQLQAPPTTPGPPASQQQQPQQPQQQQQQQPVQQQQHPGLKRPCLPA
VPHEALLEAEAPLPLGSSLLYDYTTVYQPAWDVPPSKRPHMGAPRRSSPNDAWRLSVPCR
QPEPSGDGMASTSAMQVGEAGSTPGAPSARDPYEFHDEAEEDPATTTANAAATPGGQPAS
AQQGGTPSQAATPVAVKEEEKDSVPMEIVGTEPALSSVDSSGVAGVPLAGVIGEPTTPGS
QGDLAPGGSPPTPRHPGFTRVEDLKVTECDLENIFDTSSSDESSDDPFQAPSTPSSTRPP
GATDEAITKSKNSTTAGILGAAELTRMFPTPPSLEHNAAPSPSCPGTGTDLLLGDSGDRT
LDPYGSCASPGFDGAKDWSYVYKTPKVQTFVSSQRYAPLAQLPSAALAPLPPLEVSYKPC
WQQHTPQQAQAPPQPPPGPRPLPHYHPAVHQQQQQQQQQQQQVPPSVPPPHLVGGAPGSA
QEAAFLMRMGGGGLHHPGLLDRHPSHHPGMEERACYPGPMMGSPGAAMGYEMGQAPYQAA
LMGGFPAGRGPCLGGPPEPPTPEADSLLVNLLLSDSLLELFRDHNFASCTLCVCNMNIKG
ADVGVYLPPSLVPTASEEAQYKCTCGFSAVVNRHQSHRAGLFYQDELDITGLPYEARPGP
NARALFQQQQQQQQQQQQQARLGPAARTGLGMSAAGHLPTPSLAKQVDEEGLLDYVQNQC
LGMSLSPCSVLHKTLQLGSEPPLPPPVGVRPSPAPLALLQALDGCEVAFGALEAVAARPL
EDNLKSSCLHHWPYLHCPCPASSLMTMGLLRGLQPLLQDAVHKKRNQGLWEVTYRVAGPL
TWRQFHRLAGRGTEDQCEPQPIPSLLVGYDRDWLALSPFALKYWDKLLLEPYSPSRDIAY
VVVVPDSEAVLPGVRAFFQDLSATYQALNLGRHCPLSRGGLREGLLRVSGSLALPSSEPQ
QQPASAPDDDWLGPLAEGPLGPRLRLFARACKLQLGPHLATQSLDRGMLEGPPTMNRCGA
EGRAPLASPRPPPTPEAAQEGNATPRPHDTAEGSQETSSASGAAGTASGPGATAGNQSGS
TPSSNQSGSSAVPTSTGSGSGASFGGGASSTSGSTTGASSGTSVSALAAEEGEEEQQPPA
LVVYLVEPFTLGCSDPDVLRTATLGLHRCFSQLLECLPEPLQSNTYVQILSLDSILGDAG
NILEGVCRQEQLRSHALSVFYQCARLITHQSNVKSLTGFGPAAAQDEFLKSRSGGVNPVK
LWSPPFVLAPQKDKQTELGEMFGDRREKCGILFCAYCLTEDQRWLLASVSNDKGDLLDNC
SINIEIPNRTRRKKVCVRRLGLHKLLEWLLGVAACGARAGGAVAQPWRLVVGRLGRVGHG
ELREWAGLLGRRSLLRYSRRLRELCHQCAASSSSSSSSACGGVGGIVGGPCVLSACLVSL
EPDSALRLFHDQYTPDERFTSSCVSCDLATPQDATATHILVFPTSATTQSSQATFQQDHM
DPLSTTLGDDDEIFKSLTEDIAVGNDFNDILNWTDSPEAPCSPTRRSSPPGSPIGGILGS
GPSGRQSPFQHGNALRGPGSGGGEPQEEPMQLLQQPLALGYYVSTAPTGPLPRWFWATSP
HLRDSCPVFLKSALLLHCPTVHQNHDDILHGNTHMRNYHPLDSNLTTDVLRYVLEGYNTL
SWLSLDPHSHDRQSCLPLHIQNLMKLYHAVEVLL
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctgatgttaattggcgctagcgaaaaggtcctgcctgccgtccacattcgt
attcggcacgagcaacaagttagcgtatgtgctccgctgtctcaggcggacttgtgtggc
ctcaaatggcgtcgtctgagcaccgagcactcatcgtcggcagtcggcggcagcggtggc
gtggaacccctgtccgagcccgtgctgtggtcgtttgccaagtgcctcgcggccgacctg
ctgtgcgtctggcgcagggtggcccggcccgagcagcagcagcaccggcgcgagctctgg
ctcttctggtacggcgaggagccggacctgaccggcctcgtctcgcccgagctcaacgac
acagagcaaggcagctgggaaaatggcctctcctacgagtgtcgttccctattgttcaag
gctctacacaaccttatacaaaggtgcctattatcaagaggatttaccaggatgggcaaa
tggtttcttcagccctgcgatagttcagacaaagatagggggggctccagtggaacacag
ctttcgttttcatttcacttcttcgtacatggtgacagcacggtgtgtgccagcgttgat
gtgcggcaacacccacccatccatcgtatctctaggcagcatttgttggctgcacagtct
gctagccaaagcccgtgtaaagtgattctggggccctatggcctggctggtgtgctgaca
ggccaaggattcaaagagaatgacgtgtccacccagacattgttggctgagtggcaccag
ttctacccactgcctctcctcagcaactctgcccatcggggcgatgcaactccctcaact
ggagacgaagaacccttgccgtgtgctcttgaggtccttgtaggtggtgtcaagttgcgg
tatccctcatcctatgtgttcgttgccgaaagtgatgaagtggtgccgggacagcaaacc
gagccgtcccaaggcaccacccctgcaactcctgccccagcagtagcaagtgggccattc
ggtgcagcgggtggcacacatggcagtgcacctccccggccgcacaattttcccgttggt
gccaagcctggcattccacccggtttgacagctgttctgacacctcctacgtcgccttgt
gagccaggctacctccatagtgccatgatggcagcaaggactgcaagtggtgccactgga
acgtcgcagtcttcgcggccagtgcggttggcgccccccgaaccgccaatgggaccccac
gtggctccctgtgcactggttgcacagaaggcaaaagtggctgcatggcaggattcactg
ctctccagggcatgtgatgaagaggctggcgctggctgggacttctgcgacccctgcggg
cagactcattgcttctgctttcggtgcaaccgtggcactcggccctgtgtggccactgcc
acgtcggggactgggagtatggtcagccggggcccatctccaagcccgtcgggaggtgcc
tctgccaagaagcctggtgttgacaagagccccgcacattcctccctcagtagccaggca
aagccatcacgaagtaccactggcagcaacagtgcgccttccacaccgtttcaccggcgc
agccctgtgcctggggtggactatgagggggcggtggctcttgtgtcccgagtggccagc
ggaggcctgccccagctgtcccatcagccagcagtgggggggcccccgccgtcagtgggg
tcgtgctctcacccaggcacgccactgctgctcagcgaagggcctgcctcgcaggcatct
caggcggaccccgccatgcccacactgtcccctcacccgccgccgagagatgagcctaga
ccttccccagcacccggtgcaagcccagcagcctcgggaactgattctgccaaggatcgg
cagcctggggagcagctgctctcaccatcatccttgctcgaagtaaaaccacccttggaa
gcaccaccatcctgctcaccagggggcacgtcccatccttggggtggtccttcgtcagtt
ccatcttcatccgtggctaccccgttggggtcctcgggagtacatgctccaccatcagtg
ggtaccgaagagatgccaggcactcctctggctgctcctggtggtccagcctctctgcca
ccaggcacaccggttggtggtccacctgggactcctgctccccagttgcaggctccccca
acaacacctggacctcctgcgtcacaacagcaacaaccacagcagcctcagcaacagcag
cagcaacagcccgtgcagcagcaacagcacccaggcttgaaacggccgtgtcttcctgct
gttcctcacgaggctctcctggaagctgaggcccccttgccactaggaagcagcctgctt
tatgattacaccactgtttaccaacctgcatgggatgtgcccccatccaaacgaccacac
atgggtgctcctcgaagatcgagcccgaacgatgcgtggagactttctgtgccctgccga
caaccggagcctagtggggatggcatggcttctacctctgcgatgcaagtgggggaagcc
ggttctactcccggtgctccaagtgcgagggacccatacgagtttcacgacgaggcagaa
gaagaccctgccactactactgccaatgcagctgccactcctggtggccagccagcttct
gcacagcagggtggaacacccagtcaagctgctacccctgttgcagtcaaggaagaagaa
aaggatagtgtgcctatggagatagtgggcacggagccagcactttcgtctgtagactcg
tcgggtgtggcaggcgtccctctggctggcgtcataggagagcccaccactcccggatct
cagggggacttagctccaggtggctcccctcccacgcctcggcaccccggcttcaccaga
gtcgaagacctcaaggtgaccgagtgtgacctggagaacatctttgacacctcctcctcg
gatgagagcagcgacgacccctttcaggctccatctacaccaagttccacaaggcctcca
ggtgccacagatgaagccatcacaaagtctaaaaacagcacaacggccggcattctagga
gctgcggaattgacacgcatgtttcccacgccaccatcgctggagcataatgctgcccca
tccccatcgtgccctggcactgggacagacttgctgctgggggactctggagatcgaaca
ttggacccctatggcagctgtgcaagtcctggctttgatggagctaaggactggtcgtac
gtgtacaagactcccaaggtgcaaacctttgtcagctcacaacggtacgctcccctggct
cagcttcccagcgcagcgctggcacccctgcctcctctcgaggtttcatacaagccctgc
tggcagcagcacacaccacagcaagcccaggctcctccacagccacctcccggacctcgc
ccacttcctcactaccacccggctgtacaccagcagcagcaacagcagcagcagcaacag
caacaggtgccgccttcggtgcccccaccgcatctggtgggcggtgcacctggctctgcc
caggaggctgctttcctcatgcgcatgggtggaggaggcctgcaccacccgggactcctg
gatcgccaccctagtcaccacccgggcatggaagagcgggcctgctaccctggtcccatg
atgggcagccccggtgcagctatgggctacgagatgggccaggccccctaccaggcagca
ttaatgggaggctttcctgctggccgtggcccttgcttggggggtccccctgagccccca
actcctgaggccgattcccttcttgtcaaccttctattgtccgactccttgcttgagctg
ttccgggaccacaacttcgccagttgcacactctgcgtctgcaacatgaacatcaagggt
gcggatgttggcgtgtatctgcccccatcgctggtccccactgcaagtgaggaggcccag
tacaagtgcacttgtggcttctcggctgttgtgaaccggcatcagtcgcaccgagctggg
ctattctaccaggatgagcttgacataacgggactgccttatgaggcgcgacctggacca
aatgcaagggccctctttcaacagcagcaacaacaacaacagcagcagcagcagcaggca
cggcttggcccagctgccagaacaggattgggcatgtctgctgctggccatctccccact
ccatctttggccaagcaggtagacgaggaaggcctgttggactatgttcagaaccagtgt
ctgggcatgtccttatctccgtgttcagtgctgcacaagactttgcagctgggctccgag
ccaccactgccgccgcctgtgggagtgcgcccctcgccggccccactggctcttctgcag
gccctggacggttgcgaggttgccttcggagcactcgaggctgtcgctgctcgaccactg
gaggataacctcaaaagttcctgcctgcatcactggccttatctgcactgcccatgtccc
gctagtagtttgatgacgatgggactgcttcgtggccttcagccattgctacaagatgct
gtacacaagaagcgcaaccagggtctctgggaggtcacgtaccgcgtggcaggacccctc
acttggcggcagtttcatcgtcttgctggccgaggcaccgaagaccagtgtgagccgcag
cccatcccatccctcctggttggttatgaccgggactggcttgccctctcaccctttgcc
ctgaagtactgggacaagctcttgctagagccctactcaccgtcacgggacattgcctac
gtggtggtagtgccagacagcgaagcggtgctaccgggtgtacgagctttcttccaagat
cttagcgcaacctaccaggcactgaaccttggccgccattgcccactctctcgaggaggt
ctgcgtgaggggcttcttcgtgtgtccggcagcctggctttgccatctagtgagccgcaa
cagcaacctgcttcagctcccgatgatgactggctgggccctctagcagagggacccctt
ggacctcgactgaggctcttcgctcgtgcttgcaagctacagctgggccctcacctagca
acgcagagcctagacaggggcatgctagaagggcccccaaccatgaaccggtgtggtgct
gaaggcagggcacctcttgcctcaccacggccaccgccaacgcctgaggcagctcaagaa
ggaaatgccacgccacgaccacatgacactgcagagggctcccaggagacatcctcagcg
tcaggagctgcagggacagcttcagggccgggagctacggcagggaaccagagtggctca
acgccgtcttccaaccaatctggatcaagcgcagtgccaaccagcacaggttcagggagc
ggtgccagttttggtggtggagccagcagcacatcgggatcgacaacgggtgcctcgtca
ggcaccagtgtttctgcacttgcagctgaagagggcgaggaagagcagcaacccccagcc
ctggttgtgtacctggttgaaccgttcacactgggctgctcagaccctgatgttttacgt
acggccactctggggctacaccggtgcttctcccagctcctcgagtgcctgcctgaacct
ctgcagagcaacacctatgttcagattctgagcctggactccattctgggagatgctggc
aacatattggagggggtgtgtcggcaagagcagctacggtcacatgccctctccgtgttt
tatcagtgtgcacggctcatcacacatcagtccaacgtcaaatctctcacaggatttggt
ccagcagctgcacaagatgaattcctcaagtcccgatcggggggtgtgaatccagtgaag
ttgtggagcccgccatttgtcttggctccgcaaaaggacaagcagacagaattgggagag
atgttcggggaccgcagggagaagtgtggcatcctcttttgtgcctactgcctgacagag
gaccagcgttggctcctagccagtgtcagcaatgacaaaggtgacctgctcgacaactgc
tccatcaacattgagatccccaaccggacacgtagaaaaaaagtgtgcgttcgccgatta
ggcctgcacaagctacttgagtggctactgggtgttgcggcgtgtggtgctcgtgctggt
ggtgcagtcgcccagccgtggcgactcgttgtgggtcgtttgggtcgtgttggtcatggt
gaactgcgcgagtgggcagggcttcttggccgacgaagtctgctgcgctattctcgccgg
ctgagagaactctgtcaccagtgtgctgcatcatcgtcatcctcctcctcttctgcgtgc
ggtggtgtgggtggtattgtggggggtccctgtgtgctctcggcgtgcctggtgtcactg
gaaccagacagcgccttgcggcttttccatgatcaatatacaccggatgagcggttcaca
tcttcgtgtgtcagttgtgaccttgctactccccaagatgccactgccactcacattctt
gtcttccctacatctgcgaccactcagtcctcgcaagccacctttcagcaggaccacatg
gacccattgtcgactacacttggtgacgatgatgagattttcaagtcactcacagaagac
attgctgttggcaacgacttcaatgacattctgaactggacagacagcccggaggcgcct
tgttcacctacacggaggtcttcaccaccaggttccccaattggtggcatattgggcagt
ggcccaagtgggcgccaatcaccctttcagcatggcaacgcacttcggggtcctggaagt
ggaggtggagagccccaggaagaacccatgcagctgctgcaacagcctttggccttgggc
tactatgtgtcgactgcacctacaggccctttgcctcggtggttctgggccacaagcccc
catctgagggattcatgccccgtcttcctcaagagtgccctgcttctgcattgccccacc
gtgcaccagaaccacgatgacattctacatggaaatacacacatgcgcaactaccacccg
cttgactcaaacttgaccactgatgtgctacggtacgtgctggaaggctacaacacactg
tcgtggctctccctggacccacacagccacgacaggcagtcttgcctgccgctacacatc
caaaacctaatgaagctctaccatgctgtggaggtgctgctgtaa
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integrated database retrieval system
