Dermacentor albipictus (winter tick): 135898543
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Entry
135898543 CDS
T11267
Symbol
Rrp6
Name
(RefSeq) exosome complex component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135898543 (Rrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135898543 (Rrp6)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
135898543 (Rrp6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
135898543
NCBI-ProteinID:
XP_065283622
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All DBs
Position
2:195067981..195152539
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AA seq
814 aa
AA seq
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MDSEEEPTTAASSQTKFLNLYDDSNKYAEHLLRSVVQATKAANDLPGAGEDFEYFSSFAS
FRQVMLAEGKSVLKMMSSLASHQVGKGKFEGLDLEEKFDLLADINDTVLERVGNNLDEAD
GVKKKADEVVLVSVTANRPIHTSWNKKDRSRAAKFHLLAAKNVTRPQLTFREKVDNSNTP
FVPILRNKPHSLKPLALLPERTADGQECYGHPYEWEIEHFEPSPAQLQAPTEERLPPPLE
ETPCTIVETVDQLKDMCTALSKETEIAVDLEHHSYRSFQGFTCLMQISSRSQDYIVDTLT
LRHELQMLNEVFANPKIIKVFHGADMDVVWLQRDFGLYLVGLFDTGQAARVLGLAHFSLA
FLLKHYCQIDADKRFQLADWRIRPLPPELINYAQSDTHYLLYIMDRLKHDLADRSNENDN
LLRSVFDRSKQVALKRYEKPSYHEQSYMELYRKSRKTFNSRQLHALCHLYSWRDRTARNE
DESTGYVLPNHMILEISEILPREQQGIVACCNPCPPLVRQNLNELHAIILKARDVPLNQS
LVPEKSSWPVAVQVDLDSVLHCVHDQPRHEDASLALPTLLDEDGEPVPVEKCSSQLLTKA
VPSLGAIAAKVSSAKPRGSSLVLPYKRYKAAVERDGPEVESIERETATGESPVHQMGEEK
AQSGEVSEVTEKKQEEEEKETLAAAMVAAPYEDTTLAEPLRTPRKTRCGQRGKRKRPEPD
VGLFPDGQTYNSPHDNMSSDGTVEDSSKGGTDFKPFDYTAQIPQAKEHKKQPWSYKPEGS
DDMKAGKRKRRRQQVKSHTFGNHSGEPVAKWPKR
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggattcggaagaagaacctacaaccgccgcatccagccaaacaaagtttttaaacttg
tacgatgactccaacaagtacgccgagcacctgctccgttctgttgtacaagcgacaaaa
gcagctaatgacctgcctggagctggagaagattttgagtactttagtagttttgccagt
tttcgtcaagttatgctggcagaagggaagagtgtactcaagatgatgtcttctttggcc
agtcaccaggttggaaaagggaagtttgaaggccttgacctggaggaaaagtttgatctg
ctagctgacatcaatgacactgtgctggagagagtgggaaacaaccttgacgaggcagat
ggagtaaagaaaaaggcagatgaggttgtcctcgtgtctgtgactgcaaacaggcctata
cacaccagctggaacaagaaggaccgttcccgggcagcaaagttccacctgctggcggct
aaaaacgtgacgcggccgcagctcacttttcgggaaaaggtggacaacagcaacacccct
tttgttcccatccttcgaaacaagccacactctctgaagccccttgccctgttgcctgag
cgcacagctgatggacaggaatgttatggccacccttatgagtgggagattgagcacttt
gagccatcgcctgcacagctgcaggcacccactgaagagagacttcccccacctcttgag
gagacaccttgcacgattgtggagacagtcgatcaactaaaggacatgtgcacggcactg
tcgaaggaaaccgagatcgctgtggacttagagcatcattcataccggagcttccagggc
ttcacatgcctgatgcagatctcaagtcgctcccaggactacattgtggatacattgact
ctgcgtcatgaattgcaaatgctcaacgaagtttttgccaaccccaagatcatcaaggtc
tttcatggtgcagacatggacgtagtctggctgcagcgtgactttggcctttacctggtg
gggctgttcgatacaggacaggcagctagggtgctcggcctggcccacttctctctggcc
ttcttgctcaagcattattgtcagatagacgctgacaagcggttccaacttgctgactgg
cgcataaggcccctgccaccggaattgattaattatgcgcagtcagacactcactactta
ttgtatatcatggaccgccttaaacatgacctagctgatcgcagcaatgaaaatgacaac
ctgctacggtctgtgtttgaccgcagcaagcaggtggcacttaagcgttatgaaaaaccc
agctaccacgagcagagctacatggaactgtaccgcaagagccgcaagacgttcaacagt
cgacagctgcatgccttgtgccacctgtacagttggagggaccgaacggctcgtaacgag
gatgagagcacgggatatgtgctgcccaaccacatgatcctggagatatcagagatcctt
ccaagggaacagcaaggcattgtagcctgctgcaatccatgcccacctcttgtgcgacag
aacctcaatgagctgcatgctatcatcctgaaagctcgagacgtgcctctcaaccagagc
ctggtgccagaaaagtcatcctggccagtggctgtgcaagtcgacttggatagcgtgctt
cactgcgtccatgatcagccccgacatgaggatgcaagtctggctcttcccactcttctg
gatgaagatggcgagcctgtgcctgtagaaaagtgcagttcacagctgttgaccaaagca
gtgccaagtttgggggcaatagcagccaaggtctcgtctgcaaaaccaaggggtagtagc
cttgtcttgccatacaaacgatataaggctgctgtggaacgagatggtcctgaagttgaa
tctatcgagagggagacagcaaccggtgaatcacctgtgcaccaaatgggtgaggagaag
gcccagtctggagaggttagtgaagtcacagagaaaaagcaggaagaggaagaaaaagaa
actcttgcagcagccatggtagcagccccatatgaagacacaaccctggcggagccgctg
cgtacaccacggaagacacgatgtggacagcgtggcaagaggaagaggcctgagcccgat
gtgggactgtttcctgatggccaaacatacaactcacctcatgacaacatgtcatctgac
ggcacagttgaagacagcagcaaaggaggaaccgattttaagcccttcgattacacagca
caaatacctcaagctaaagagcataaaaaacagccttggagttacaagcccgaggggtct
gatgacatgaaggctggaaaaaggaagcgaagaagacagcaggtcaagagccacacattt
ggaaaccacagcggcgaacctgttgccaaatggcccaagcggtga
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