Dermacentor albipictus (winter tick): 135900293
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Entry
135900293 CDS
T11267
Symbol
U2af50
Name
(RefSeq) splicing factor U2AF 50 kDa subunit
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135900293 (U2af50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dalb03041
]
135900293 (U2af50)
Spliceosome [BR:
dalb03041
]
Complex A
U2 snRNP components
U2 related factors
135900293 (U2af50)
Complex B
135900293 (U2af50)
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GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_occluded
DUF8489
RRM_7
RRM_9
Transformer
Motif
Other DBs
NCBI-GeneID:
135900293
NCBI-ProteinID:
XP_065285821
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All DBs
Position
1:complement(380449340..380514998)
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AA seq
470 aa
AA seq
DB search
MGEERDLDKDKDRRRRRSRSRSRSRERRRRSRSRETRRRSRSRSRDRGAAGGAKKSRRRK
PSIYWDVPPPGFEHITPLQYKAMQASGQIPATMLAATGAIATVGGTTTTIGGGGLGGGGG
GIGGGGGAGPVAQAIIQPPAAVPIVGGTITRQARRLYVGNIPFGCSEEEMMDYFNAQMHA
CGFSQAPGNPVLACQINLDKNFAFLEFRSIDETTQAMAFDGINFKGQSLKIRRPHDYQPM
PGMSETPSVAVPGVISTVVQDSPHKIFIGGLPNYLNEDQVRELLMSFGQLRAFNLVKDSA
TGLSKGYAFCEYVEVATTDQAIMGLNGMQLGDKKLIVQRASVGAKNSQMNQAPVQIQVPG
LQLQGGAGPPTEVLCLMNLVCPEELKDEEEYEDILEDIHEECNKYGVVKSIEIPRPIDGV
EVPGCGKAYVEFNSVIDCQKAQQSLTGRKFSNRVVVTSYFDPDKYHRREF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagaacgagatctcgacaaagacaaggaccggagacgaaggcgcagtcgatct
cgatccagaagccgtgaacgcaggcgccgttccaggtctcgggagaccaggaggagaagc
cgaagtcgtagccgagacagaggtgccgccggaggagcaaaaaagtctcgcagaaggaag
ccctctatttactgggatgtgccgcctcctggctttgagcacatcactccccttcagtac
aaggccatgcaagcgtctggtcagattccggccactatgctggcagctacgggcgccata
gccacagtgggcgggactaccacgaccataggcggaggaggccttggaggaggaggagga
ggaataggaggaggagggggcgcaggccctgttgcacaggcaatcatccaaccaccagct
gctgtgcctattgtgggcggcaccatcactcgtcaagcacggcgtctctacgtgggaaat
ataccttttggctgctctgaggaggaaatgatggactacttcaacgcccagatgcatgcc
tgtggcttctcccaagcaccaggcaatccagtgctagcttgccagatcaacctggacaag
aactttgcatttttagagtttcgatcaattgatgagacaacccaggctatggcattcgat
ggcatcaacttcaagggccagagcttgaagatcagacggccccatgattaccagccgatg
ccaggcatgtctgagaccccctcggtggccgtcccaggtgttatttcaacggtagtgcaa
gactcacctcataaaatattcattgggggattgccgaactatctaaacgaagaccaggtc
agggagcttttgatgtcatttggacagctgcgtgcattcaatcttgtgaaagacagcgct
actggactctccaaaggctatgcattttgcgagtatgtggaggttgctactacagaccag
gcaattatgggactcaatggaatgcagcttggtgataagaaactgatagtgcaaagggca
agtgtcggcgcaaagaacagtcaaatgaatcaagccccagtacagattcaggtaccaggt
ttgcaactacagggcggcgcaggccctccaacagaagtgctatgcctcatgaaccttgtg
tgccctgaagagctgaaagatgaagaggagtatgaggacatccttgaagacattcatgag
gagtgtaacaagtacggcgtcgtcaaaagcattgagataccccggccaattgatggtgta
gaagtacctggttgtggaaaggcttatgtggagttcaattctgtcatcgactgccagaag
gcacagcagagcttgacgggacgcaaattcagcaaccgtgtggttgtaacatcctacttc
gacccggacaagtaccaccgtcgagaattctga
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