Dermacentor albipictus (winter tick): 135903944
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Entry
135903944 CDS
T11267
Symbol
U4-U6-60K
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135903944 (U4-U6-60K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dalb03041
]
135903944 (U4-U6-60K)
Spliceosome [BR:
dalb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135903944 (U4-U6-60K)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR41
WD_LRWD1
Ge1_WD40
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
135903944
NCBI-ProteinID:
XP_065290499
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Position
1:complement(72196707..72288214)
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AA seq
558 aa
AA seq
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MSCDLNVIYNTNARPIHACIPSILPHLSGHFGELDEEVMSDDEDVAYVKRQKVVHYGSLE
EKERQRLADREAEDGSDDDSQSTDVKAAMASGNIHISEEYMEIEDESGRDKQQLLEEFER
RKKARQINVSTDDTEVKSTLRDMGEPICLFGEGPADRRERLRHLLALVGQDAIRRKKEEE
RERERELRKDTYETTWYHESNEKLRECRLWIARFSLPRARHRIATAKEKLKAQGPAASDS
QLHAKRQELYKTLRSLNINCSQIGDTRPISFCEFSPNSQMLATSSWSGLCKLWSIPECNP
IRTLRGHNCNVGAITFHPRSTYLQSENALNMASCSADGVVNLWNLKSEEPISSLRGLCPH
RVSRVAFHPSGRFLACCVFDHSWRLIDLETETEVLHQEGHSKAVYDISFQCDGSLAATGG
MDAFGRVWDLRTGRCIMFLDGHLKSVLSLCFSPNGYVLATGSEDNTIKLWDLRQRKCEYT
IPAHHNLVSRVIFEKLSGEYLVTTSYDNTVKIWSNPEWTPIHSLSGHDGKIMGADISPNG
KYLATSSFDRTFKLWTPE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcgatttgaatgttatttataacacaaatgcacgccccatacacgcatgcatt
cccagtatacttccccatctttcaggacacttcggcgagcttgacgaagaggtgatgtcc
gacgatgaagatgtcgcatatgtcaagcgacagaaagttgttcactatggaagccttgaa
gaaaaagagcgtcagagactggcagatagagaagctgaagatggtagtgatgatgattca
caaagcacggacgtcaaagcagccatggcctccggaaacattcacatatctgaggaatac
atggagattgaggatgaaagtggccgagacaaacagcagctgcttgaggagttcgagaga
agaaaaaaggctcgtcagatcaacgtatcaactgatgacactgaggtcaagtcaactttg
cgcgatatgggagaacctatttgcctgtttggggagggccctgcagaccggcgggaacgc
ttgcgtcaccttctggcactggttggacaagatgcaatacggcgcaagaaggaagaagaa
cgtgagagagagcgagagctgcggaaggacacatacgaaacaacttggtatcatgaaagt
aatgagaagctgcgcgagtgccgtctttggatagcacgtttctccttacctcgtgctcgg
caccgtatcgccacagccaaagagaaactgaaagcccaaggtcctgctgcatcagattca
cagctgcacgccaagcggcaggaactgtacaagactctcagatctttgaatatcaactgc
agccaaattggggatacacgcccaatctccttttgcgagtttagtcccaactcgcaaatg
ctagcaacgtcttcctggagtgggctgtgcaagctgtggtcgatcccagagtgcaacccc
atcaggaccttaagaggacacaattgtaatgtgggtgccatcacattccacccacggtca
acttacctgcagtctgagaatgcactcaacatggcctcttgctctgctgatggcgtcgtc
aacttgtggaacttgaagagtgaagaaccaatcagctcattgagagggttgtgcccacac
agggtctccagagtggcattccacccttccggacgcttcttagcatgctgtgtatttgat
cattcttggcgcctaatagacttggaaactgaaacagaagtgctacaccaagaagggcac
agcaaagctgtttatgacattagcttccaatgtgatggttcattggctgctactggtggc
atggatgcatttgggcgtgtctgggacctccgtactgggcgttgcatcatgtttctagat
ggtcatctgaaatctgtgctaagcctctgcttctcgccaaatggctatgtcctggccact
ggcagtgaagacaacactatcaagctgtgggacttaaggcaaagaaagtgtgaatacacc
attcctgctcatcacaaccttgtgtcaagggtaatttttgaaaaattgtctggggaatac
cttgtcacaacatcgtacgacaacactgttaagatctggtccaatcctgaatggactcca
atacatagcctcagtggtcacgatggcaaaattatgggtgctgacatttcacctaatggg
aaatacttggcgacatcatcctttgaccgcacatttaagctctggactccagaataa
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