Dermacentor albipictus (winter tick): 135906041
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Entry
135906041 CDS
T11267
Symbol
Col4a1
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb04382
Cornified envelope formation
dalb04512
ECM-receptor interaction
dalb04518
Integrin signaling
dalb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135906041 (Col4a1)
04518 Integrin signaling
135906041 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135906041 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135906041 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dalb04147
]
135906041 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
dalb00536
]
135906041 (Col4a1)
Exosome [BR:
dalb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135906041 (Col4a1)
Glycosaminoglycan binding proteins [BR:
dalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135906041 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135906041
NCBI-ProteinID:
XP_065293259
LinkDB
All DBs
Position
1:28452958..28518707
Genome browser
AA seq
1805 aa
AA seq
DB search
MSSPRAAEMVASGLAQRLLLLSSLALCFYSALSSNYPAEYRAFYRDNSRYNRSGSYNGRD
QNGSRRGGYNGYAEQRNCSSCSGCRCIGEKGSRGTPGLTGPSGPPGIQGHPGPEGLPGDK
GEKGEAGRDGPRGPKGERGKMGMPGFPGINGIPGIPGSPGSRGAPGLDGCNGTKGDPGPL
GPLGPHGPPGDPGPPGPPGPRGEPAYGPPGTKGEKGDPGRNGQVGPPGPPGADGVPGQKG
DIGPEGPPGFRGNDGPVGPKGNMGIGFTGSKGEPGEKGSQGSRGPPGNCSEPSHKVPDSI
VGPPGERGLKGSKGEPGMKGDPGQSGNPGPSGKHGDIGMKGEKGLPGHPGPRGKDGYPGP
VGPAGFKGDRGDEGLPGLKGVSGLRGDPGVPGEPGPRGLPGPPGLPGGSQGRAGPAGPPG
PKGQPGPPGPPGKDGFPGDLGPRGLPGNAGGPGQPGIPGREGPPGPKGDKGDNGLPGLPG
LEGPTGYPGAPGPKGEPGPKGVPGISYPGIKGMDGSNGLDGFPGAKGERGPKGERGAPGD
SLEGIPGRPGPIGPKGEKGFDGFPGTPGTPGTPGSKGEKGGSCLSCENGDKGEKGERGRD
GAPGQPGPRGHEGASGAPGERGDDGLPGPPGPPGAEGIPGRPGRDGERGDKGEPAIFDRD
IIPPGVGQKGEKGVPGPLGPPGFDGRDGPPGPSGLDGLRGLKGEKGLPGAPGTPGQPGPE
GRPGPVGQKGDTGYGRKGEQGERGPKGQRGFTGGKGEKGLRGPPGPGSLLDPVRGPPGPP
GEPGRPGLDGLQGPKGDGGIPGRDGFPGVKGDRGDSGYPGQPGPRGLPGPRGEKGEQGPG
GIPGEPGAKGNPGLPGLDGPPGPVGEPGFPGSGLPGPPGLPGFPGLKGDRGYPGGPGLPG
EPGLPGFPGAKGDTGAPGLPGVLGEKGSKGEPAREGTPGPQGPQGLPGFPGEKGEPGYPG
LSGAPGTPGLPGTKGEAGFPGLPGLPGFDGAPGAPGEPGRDGTIGFPGVPGEKGDKGGPG
FPGIPGQRGTDGAPGLLGDKGDAGYPGAPGFDGAPGAPGAKGEPGLPGLPGEKGVPGDVS
EKGERGYPGLPGSPGPVGPPGAPGYDGVAGLKGDPGPPGQGLPGLQGPPGPKGADGFPGV
PGTPGARGADGSPGFPGVKGDRGFPGLPGPPGQPGRDGVPGIIGPKGLDGAPGLPGNKGD
RGQDGFPGVPGPVGPVGPTGSPGFPGLDGGPGQKGDRGYPGLPGEKGEKGLKGDEGVPGF
PGLPGEKGNRGYDGVPGLPGDKGDRGTPGLPGLSGLDGERGFPGAPGPQGLPGLPGQGGV
GAKGEKGDVGRPGLDGFPGLPGLKGDAGFPGLPGQRGPPGESPTEGIPGQKGERGYPGPP
GLPGQNGLPGPKGQDGFPGLDGEKGDAGFPGLPGPPGPPGPPGFNGEDGFPGEPGVKGDK
GDAGFPGLPGLVGLKGEPGLPGFAGLDGSPGLPGPQGEKGEPGPANLVKGEKGERGETGA
QGLPGPKGNPGAPGFPGLKGEAGRPGPQGPPGPVGPVGPKGERGLQGTAGLPGLPGAQGQ
PGNPGPPGLPGGDYLMGILLVRHSQSATVPTCFNGMTKLWDGYSLLYIEGNEKSHNQDLG
YAGSCLRRFSTMPFLFCDFNSVCNYASRNDKSYWLSTNAPIPMMPVGEDTIRQYISRCVV
CEAPANVIAVHSQSMSIPECPSGGWNQLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFR
ATPFIECNGARGTCHYFANKLSFWLSTIEQDFQFERPVSETLKAGKLRNRVSRCAVCIKD
SNIGF
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctccgcgggcagcagagatggtggcctcgggtctagcccaaagattgctgctg
ctatcatcactcgcactgtgcttctatagcgcactgtcttctaattacccggcagagtac
cgtgcattctatcgcgacaactcgcggtacaaccggtccggatcgtacaatggccgggac
cagaacggaagccggcgcggaggctacaacggctacgctgaacagaggaactgcagctcc
tgctcgggatgcagatgtataggagaaaaaggatctcggggaacgccgggccttaccggt
ccatcaggacctcctggcatccagggacaccctggacccgaaggcctgcctggtgacaaa
ggagagaaaggagaggccggtcgggacggaccccgcggccccaagggagaacggggaaaa
atgggcatgcccggattccccggaattaacggaataccgggcattccgggatctccggga
tccagaggagctcctggcctcgacggttgcaacggtacaaagggagatcctggcccactc
ggtcctctcggaccgcacggaccacccggcgatcccggtccaccgggtcctccaggacct
agaggagagcccgcctacggacccccaggaaccaagggagagaagggagaccccggacgc
aatggtcaagttggacctcccggaccaccgggagctgatggcgttccaggacaaaagggt
gacattggccccgaaggaccaccgggtttccgagggaacgacggaccagtaggacccaaa
ggaaacatgggcatcggcttcactggaagcaagggagaaccaggtgaaaaaggctctcaa
ggatcgcgtggaccacccgggaactgcagcgagccgagtcacaaagttcctgacagcatt
gttggccctcctggcgaaagaggactaaagggaagcaagggtgagccaggcatgaaggga
gatcccggacaatccggaaatccaggaccaagcggaaagcatggcgacatcggcatgaag
ggagaaaagggcttgccgggacacccaggccccaggggcaaagacggctacccaggacct
gttgggccagcaggatttaagggtgacagaggagatgaaggtcttccaggtttgaaagga
gtcagcggcctgcgaggagaccctggcgttcccggtgaaccaggtccccgtggtctgcca
ggaccacccggtcttccaggaggttcgcaaggaagggccggtcccgctggtcctcctggt
cctaaaggtcagccaggtcctcctggtccacccgggaaagacggattccccggtgacctc
ggtccccgcggtttgccgggcaatgctggaggacccggccagcccggaattccgggccgc
gaaggcccacctggcccgaagggtgacaagggtgacaacggacttccgggtctgcctggt
cttgagggcccaacgggctacccaggagccccaggtcccaagggtgaacctggtccgaag
ggtgtccccggcatctcctacccgggtatcaaaggcatggacggcagcaatggtcttgac
ggcttccctggcgccaagggagagaggggacccaagggagagcgcggtgcccccggcgac
tctctggagggcattcctggccgtcccggccccattggaccgaagggagaaaaaggcttc
gacggattcccgggcacacctggcacacctggaactccaggctccaaaggcgagaagggt
ggaagttgcctgtcctgcgaaaatggcgataaaggcgagaaaggcgagcgcggtcgtgat
ggagcgccgggccagcctggaccaagaggccatgagggagcatctggtgcccctggagaa
cgcggtgacgatggcctgcccggacctccaggaccgcctggcgccgagggtattcctggc
agaccaggccgcgatggggaaagaggagataagggtgaaccagcaattttcgacagagat
atcatcccgccgggagtcggtcagaaaggagaaaaaggcgtgccaggaccactaggaccg
cccggcttcgacggccgtgacggacctccaggacctagcggtcttgacggacttcgtgga
ctgaagggcgagaagggtttgcctggagctcccggaacccctggtcagcccggacctgag
ggtcggccgggtcctgtcggacagaagggagataccggatacggtcgcaagggcgaacag
ggcgagaggggccccaagggacagcgaggcttcaccggaggcaagggcgagaagggactg
cgcggcccgccaggtcccggcagcttgttggacccagtgcgtggacctcctggaccaccg
ggagaacccggtaggcctggactggacggactgcagggacccaagggtgatggtggcatt
cctggtcgcgatggatttcctggtgtgaagggagacagaggagactctggataccccgga
cagcccggccccagaggtcttccgggtcctcgtggcgagaagggtgaacagggacctggg
ggaatccccggagaaccaggagcaaagggcaacccaggactgccgggtctcgacgggccc
ccaggacccgttggtgaacctggcttccccggctccggcctgccgggaccgcccggtctg
cccggcttcccgggactgaagggagacaggggatacccaggaggacccggccttccaggt
gaaccgggactgccgggattcccgggtgcgaagggtgacactggcgcacccggcttgccc
ggtgtcttgggtgaaaagggcagcaaaggtgaaccagccagagaagggactcccggacct
caaggaccccaaggtttgcccggattccctggagagaaaggcgagcccggttaccccggc
ctatcaggagcacccggcacaccggggcttccaggaacaaagggcgaagccggctttcct
ggcctgccaggcctgcccggttttgacggagccccaggagcgcccggagagcccggacgg
gacggcacaatcggcttcccgggagtaccaggcgaaaagggcgacaaaggaggtcctggc
ttccccggaattccgggccagcgcggcactgatggagcccccggtttgctcggtgataag
ggcgacgccggctaccccggagctccaggcttcgacggtgcccccggagcgcctggagcc
aagggagagcctggtctacccggactgcctggagaaaagggtgtgcctggcgacgtttcc
gagaagggagagagaggatacccgggtcttcctggatcccctggccccgttggtcctcct
ggagcgcctggttatgatggagtcgctgggctgaagggagatcctggaccaccgggccaa
ggcctaccaggtcttcagggcccaccaggaccaaaaggagctgatggcttcccgggagtg
cctggaacaccaggagcgaggggtgccgacggatcacctggtttccccggcgttaaggga
gacaggggcttccccggcctcccaggcccgccgggtcaaccaggacgcgacggcgtacca
ggtataataggaccaaagggattggatggcgcgcctggcttgcccggaaacaagggcgac
cgcggccaagatggctttccgggagttccgggtcccgtcggacctgtcggacctaccgga
tcacccggtttccccggcctggacggagggccaggccaaaagggagaccgtggataccct
ggcctgcccggtgaaaagggagaaaagggtctcaagggagacgaaggcgttcccggattc
ccgggacttcctggcgaaaaaggaaaccgaggatacgatggagttcctggactcccaggt
gacaagggagacagagggacgcccggactgccaggtctctcaggtcttgacggagagcga
gggttcccaggggcccccggacctcagggccttcctggtcttccaggccaaggcggagta
ggtgccaagggtgaaaagggcgacgtcggccgacccggcctggacggttttcctggactt
cctggtttaaagggtgacgcaggtttccccgggctgcccggccagaggggacccccaggc
gagtctcccactgaaggtataccgggacagaagggcgagcgcggctaccccggtccgcca
ggtctgcctggtcagaacggcttgccgggcccgaagggtcaggacggtttcccaggcctg
gatggtgaaaagggagatgccggcttcccaggcctcccaggacccccgggaccaccgggg
ccgccaggatttaatggcgaagatggattccctggcgagccgggagttaagggcgacaag
ggcgacgctggtttcccaggtcttccaggcttggtaggcctcaaaggagaacctggtctt
cctggattcgctggtttggacggatctcccgggcttcctggtccccagggagaaaaagga
gaaccaggccctgccaacttagtgaagggagaaaagggtgaacgtggagagacgggtgcc
caaggcctgccaggacctaagggcaacccaggagcccctggcttcccagggctgaagggt
gaggctggccgaccaggtccacagggtcctccgggaccagtgggtcctgtaggaccaaag
ggagaacgcggtcttcaaggtaccgcgggtctaccgggtctcccgggagcacagggccaa
ccaggcaatccgggtccgccaggactgcccggcggcgactacctcatgggaatcctgttg
gtccgccacagccagtcggcgacagtgccgacctgcttcaacggcatgaccaagctctgg
gacggttactcgctcctctacatcgaaggcaacgaaaagtcccacaaccaggatctcggt
tatgccggctcctgcctcaggagatttagcaccatgcctttcctgttttgcgacttcaac
agcgtgtgcaattacgccagccgcaacgacaagtcctactggctttcgacgaacgcaccg
ataccaatgatgcccgttggcgaagacaccatcagacagtacatcagtcgatgcgtggtc
tgtgaagccccagccaacgtcatagcagtccacagccagtccatgtcaatacccgagtgc
ccatctggagggtggaaccagttgtggatcggttacagttttgccatgcacacggcagcc
ggagccgagggaggcggtcagtcgctgtccagtcccggttcgtgcctcgaggacttcagg
gccacgccgttcattgagtgcaacggcgcgcgcggcacgtgccactacttcgccaataag
ctcagcttctggctgtccaccatcgagcaggacttccagttcgaacggcccgtcagcgaa
acgctcaaggctggcaagcttcgcaaccgtgttagtcgctgtgctgtatgcatcaaagac
tccaacatcggcttctag
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