Dermacentor albipictus (winter tick): 135908563
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Entry
135908563 CDS
T11267
Name
(RefSeq) 5'-3' exoribonuclease 2-like
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03008
Ribosome biogenesis in eukaryotes
dalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135908563
09123 Folding, sorting and degradation
03018 RNA degradation
135908563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
135908563
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135908563
03009 Ribosome biogenesis [BR:
dalb03009
]
135908563
03016 Transfer RNA biogenesis [BR:
dalb03016
]
135908563
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135908563
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
135908563
Ribosome biogenesis [BR:
dalb03009
]
Eukaryotic type
Pre-60S particles
RNases
135908563
Transfer RNA biogenesis [BR:
dalb03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
135908563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
135908563
NCBI-ProteinID:
XP_065296437
LinkDB
All DBs
Position
9:complement(70759573..70854626)
Genome browser
AA seq
834 aa
AA seq
DB search
MLSRCRFWGSRQNPGSHAPTLVPFCERVSSLASRDDTTDGTKMERGLLKWVTTRYPSIIT
TIVEDKPCVDGGTNDPGESSNPKQTSPDFDNLFLDLGYILRVCANPAHKPAPNSEDEIMK
DIFDYIDRVFKIVRPRRLLYMALDGVVPRARMNAERSKRFKGAEESEQRATKEHALRSAL
EERGERLPPERPDFDANCIVPGTDFMERVTKSLHFYIHQRLNWDDSWKDVQVALSDSKVP
GEGKQKIMDFIRTQEERPNHDPNTKHCIYGHDADLIMMCLLMHAANITIIKEDHRFDIKF
CRLCQQTGHDMERCEGLPDDRQERMPTPEVPLAFVHIDVLRDRLARDLRVKDLPFPFDPE
RAIADWVFLCLVVENDFLPNLPSLSVSENAVERLETIYKETLCNLKGYLTEDGSVELTRF
EVLMTELAKSEEEIFRRRRRNQVNAGTIEREKQQRKAAADKEKERAFSTDERLADIDDVL
VSTQGAKRFLSDESLDEEEDDIDDEVRLWEPGWRQRYYVAKFDVSSDNEAFPHHLAREYT
EGLCWVLRYYVKGSGSWKWFFPHLYGPFASDFVNVADIVVDTNQETEPLKPMEQLMFVLP
VTSSRHLPEPLADLMEGPKSPIIDFYPKKFSIDPNGHKWNRQGVALLPFVEEGRLLEVLR
VVYPLLDTNESDRNTEGDVLLYVREGQPGYDYFMDLYDAYDDYDEEFELEPQYFSGIGGK
ILLSQNVVPKGSDMASPVDGVDPIRDCAVTCHYLDLQRLSSFCFLLYSAYATGAPDRDVP
LWFPLQPKVPERERCALNCDAAAETTPHARCNRDRRAVLFCPRLAELSSHDVTP
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgttatctcggtgtcgtttttggggttcgcggcagaatccgggaagccacgcccccaca
ctggtgcccttttgtgaacgagtctcttcgctggcctccagggacgacaccacggacggt
acgaagatggagagaggattattgaagtgggtaaccacgcgttatccgtccatcatcaca
accatcgtcgaggacaagccctgcgtcgatggcggaacaaacgacccaggagaaagcagc
aatccgaaacaaacttcgccagactttgacaacttgtttctcgacctgggatacatctta
cgcgtgtgcgctaatccagctcacaagcctgctcccaatagcgaggacgaaataatgaag
gacatatttgactacattgaccgagtcttcaagatcgttcggccaagacgactactgtac
atggccctggacggtgtggtgcccagggccagaatgaacgcggagcgctcgaagcgcttc
aagggcgccgaggagtccgagcagcgggccacgaaagagcacgcgctgcggtcggcgctg
gaggaacgcggcgagcggctgcctcccgagcgtccggacttcgacgccaactgcatcgtg
ccgggcaccgacttcatggagcgggtcaccaagtcgctccacttctacattcaccagcgg
ctcaactgggacgacagctggaaggacgtccaggtggcgctgtccgactcaaaggtgccc
ggcgaaggaaagcagaaaataatggacttcatccggacgcaagaggagcgccccaaccac
gacccgaacacgaagcattgtatttacggtcatgatgctgacctgatcatgatgtgcttg
ctgatgcatgccgcaaacatcaccatcatcaaggaggaccaccgctttgatatcaaattc
tgtcgactctgccaacagacgggtcacgatatggagagatgcgaaggccttcccgacgat
cgccaagaacggatgcccacacccgaagtaccactggccttcgtccacatcgacgtgctg
cgtgaccggctggcacgtgatcttcgagtgaaggacctaccgtttccgttcgacccggag
agggccatcgccgactgggtgtttctttgccttgtcgttgaaaacgacttcctaccgaac
ctgccatctctgtcagtcagtgaaaatgccgttgaaagactcgaaactatctacaaggaa
acgttgtgcaatctgaagggctacctcacggaagatggaagcgtcgagctcacccgattc
gaagtgctcatgaccgaattggcgaagtcggaagaggagatattccggaggcgccgtcga
aaccaagtgaatgccggaacgatagagagagaaaagcagcagcggaaggcggcagccgac
aaggaaaaagagcgagccttcagcactgacgaacggttggccgacattgacgacgtactt
gtgtccacacagggcgccaagcgttttctgtccgacgagagcctcgacgaagaggaggac
gacatcgacgacgaagtgcgcctttgggaacctggctggagacaacggtactacgtggcc
aaattcgacgtgagctcggataacgaagcgtttccacatcacctggcccgcgaatacacc
gagggactttgctgggtgcttcggtactacgttaagggatccgggtcatggaagtggttt
tttccgcatctctacgggccctttgcgtcggatttcgtcaatgtagccgacattgtcgtc
gacactaaccaagagacagaacctctcaagcccatggaacaactcatgttcgtcctgccg
gtgaccagcagccgtcacctacccgaaccgctggctgacctcatggagggcccgaagtcg
cctatcattgatttctacccaaagaaattcagcatcgaccccaacggccacaaatggaac
cggcaaggtgtcgcgctgttgccctttgtggaagaggggcggctgcttgaagttctccgc
gtggtatacccactactggacacgaatgaatccgatcgcaacaccgaaggtgacgtcctc
ctgtacgtgcgcgaaggacaacccggctacgactacttcatggatctctacgacgcttac
gatgactacgacgaggaatttgagctggagccgcagtacttcagcggcattggaggcaaa
atcctgttgagccagaacgtggttccgaaaggaagtgacatggcgtccccggtggacggc
gtggaccccattcgcgactgcgctgttacatgtcattacttggaccttcagcggctttct
tctttttgcttcttgctttattcagcgtacgccacaggagctccagatagggatgttcca
ctatggtttccgcttcagcccaaggtacctgaacgagagcgctgtgccttgaactgcgac
gcagctgcagagacgacgcctcacgctcgctgcaaccgcgacagaagagcagtgcttttt
tgccctaggcttgcggagctttcgagccacgacgtgacgccgtaa
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