KEGG   Dermacentor albipictus (winter tick): 135909367
Entry
135909367         CDS       T11267                                 
Symbol
lt
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
dalb  Dermacentor albipictus (winter tick)
Pathway
dalb04140  Autophagy - animal
dalb04142  Lysosome biogenesis
dalb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dalb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    135909367 (lt)
   04140 Autophagy - animal
    135909367 (lt)
   04148 Efferocytosis
    135909367 (lt)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dalb04131]
    135909367 (lt)
Membrane trafficking [BR:dalb04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    135909367 (lt)
SSDB
Motif
Pfam: TPR_Vps41 Beta-prop_Vps41 Clathrin zf-RING_Vps41 VPS18_solenoid_2nd Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st zf_RING_Vps8_fungal Beta-prop_HPS5 WD40_WDHD1_1st WDR55 Beta-prop_THOC3 zf_RING_Vps8 WD40 Beta-prop_WDR5 Beta-prop_EML_2 TPR_GEMI5 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd zf-RING_11 ASA1 TPR_7 EIF3I zf-RING_5 Gin VPS18_RING_C UTP15_C UVR
Other DBs
NCBI-GeneID: 135909367
NCBI-ProteinID: XP_065297391
LinkDB
Position
1:500030023..500218961
AA seq 852 aa
MEADSVEQDQELSDEEEEMEPKLRYERILNDMPEILRSGAASCIAVHPKFIALGMHSGVV
YILDHQGNNIRNKELQLHTDTVLQLSIDEQGDHLASCSRDGKVVVHGLYSSDQNQKLTFD
RPVGAVAIDPNFYRSGSGRRFVTGVDKVVLYEKGFLSRYRTSILHQGEGPVRNISWKGRF
AAWATDLTILVYDMQVLDFICMISRDHDPLLKQPELHRCILTWRDERCLLVGWADRVKVC
CIRQRDPQRTVAENNVQPVQDSTQRNQADIYVEIVSMFQTDYYVCGLAHLCSGSLVALTV
EKNTDNSGEGSRPQLRVMEPHLGESVERSSDILSVRGFRAYRASDYCLDSLPEEGLFFVV
SPKDVIVAKPRDQDDHVDWLLKHQKYEEAVQVALSSRDLKRHALQDVGRQYLEQLIERQE
FERAAEMCPTVFGADARFWEELVYRFARLRQLRCLAPVLPQGGLDPTAYEMVLNEFLQLD
PEGFLKLICEWDSALYSVPTVVNAVRDRLSYEPSSVPLLKGLAHLYSLEGKFDLAIAIYL
EIGAADAVFTLVQKHGLYGVVQEKLVLLIRLDEEKANQLLVNSTDRLPPATVADRLRPHP
RALFRYLDALFKRSPALCEAQHMELARLYAQFEPDKLLPLLRQSHSYPLEEALRLCQERK
LVPATIFLLKRMGNTKEALHQIMAKLEDVHQAIAFCKEHDDSELWADLIEYSLDKPPFIT
TLLHKIGAHVNPILLIVRIPVGLDIPQLRDSLVKIMRDYNLQISLREGCKKILVSDCIGL
LQKLHRQQSRGIAVAYDQLCHACNRRILSKDVRHLEDVVVFFCKHAFHSNCLPSLPMCSL
CSADKQAQSLGA
NT seq 2559 nt   +upstreamnt  +downstreamnt
atggaagccgatagcgtggagcaggaccaggagctgtccgatgaggaggaggaaatggag
ccaaagctgcgctatgagcgcattctcaacgacatgcccgaaatcctgcgcagtggtgcg
gccagctgtattgctgtgcaccctaagtttatagcactcggcatgcactctggtgtggtg
tacatcctggaccaccagggcaacaatattcgcaacaaagagctccagctgcacacagac
acggtgctccaactgagcatcgatgaacagggcgaccacttggccagctgctcacgtgac
ggcaaggtggtggtccacggtctctattcaagtgaccagaaccagaagctgacctttgac
cgtcccgtcggtgctgtggccattgacccgaacttctatcgttctggctcaggcaggcgt
tttgtcacaggcgttgacaaggtggtgctgtacgagaaggggttcctctcccgctatcgc
accagcatcctgcaccagggtgagggcccagtacgaaacatctcttggaaaggacgcttt
gccgcctgggcaaccgacctgacaatcctggtgtatgacatgcaagtgctggatttcatc
tgcatgattagcagggaccatgaccccctgctgaaacaaccagaactccatcgatgcatc
ctgacatggcgtgatgagcggtgcctgcttgtgggttgggctgaccgcgtgaaggtgtgc
tgcatccgtcagcgggacccgcaacgcactgtggctgagaacaacgtccaaccagtgcaa
gactccacgcaacgcaaccaggctgatatctacgttgagattgtgtccatgttccagacc
gattattatgtgtgtggcctggcacacctctgctcgggtagcctggtggccctcactgtg
gagaaaaacaccgacaactcaggcgagggcagtcgaccccaactgagggttatggagccc
cacctcggcgaaagtgttgagcgctcaagtgacatcctttctgtgcggggtttccgggct
taccgggccagtgactactgccttgacagcctcccagaggagggtcttttctttgtggtg
agccctaaggatgtcatagtagccaagcctcgtgaccaggatgaccacgtcgactggctc
ttgaagcaccagaagtatgaggaagctgtgcaggttgcattgtccagtcgtgatctcaag
aggcacgcattacaagatgtgggcaggcagtacctggaacagctgattgagaggcaagag
tttgagcgagcggccgagatgtgcccaactgtgtttggggcggacgcacgcttctgggaa
gagctggtgtaccgctttgcacgccttcggcagctgcgctgtctggcccctgtgctgcct
caggggggccttgatcccactgcctatgaaatggtgctcaatgaattcctccagctagac
cccgagggcttcctcaagctcatctgcgagtgggactcggcactgtacagtgtgccaact
gtggtgaatgccgtacgggaccgccttagctatgagccatccagtgtaccgctgctgaaa
gggctggcccatctctactccctcgagggcaagtttgaccttgccatcgccatctacctt
gagattggcgcagcagatgcggtgttcacgttggtgcaaaagcacggcctgtatggtgtg
gtacaggagaagctagtgctgttgatccggctggacgaggagaaagccaaccagctgttg
gtgaactccactgaccggctaccaccggccactgttgccgaccgtctgaggccgcatcca
cgagccttgtttcgttacctggatgcactgttcaagcgcagccctgcgttgtgcgaggcc
cagcacatggaactggcacgcttgtacgcccagtttgaacctgacaagttgctgccactg
ctgcgccagtcacacagctaccctttggaagaggcactaaggctgtgccaggaacggaag
ctcgttccagcgaccatcttcctgctcaagcgcatgggcaacaccaaggaggcccttcat
cagatcatggccaagctggaggatgtccatcaggccatcgccttctgcaaggagcatgac
gactccgaactctgggcagatctcatcgagtactcgctcgacaagccacccttcatcacg
acattgttgcacaagattggtgcacacgtcaaccccatcctgctgattgtgcgcatcccc
gtggggctggacatccctcagctccgggactctttggtcaagatcatgcgggactacaac
ctccagatctccctgcgtgaaggctgcaagaagatcctggtgtcggattgcatcggcctg
ctgcagaagctgcaccggcagcagagccgtggcattgccgttgcctatgaccagctgtgc
catgcttgcaatcgccggatactctccaaagatgttcgtcacctggaggatgtggtagtg
ttcttctgcaagcatgccttccatagcaactgccttcccagtctaccaatgtgcagcctc
tgcagtgccgacaagcaagcacagagcctgggagcctga

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