Dermacentor albipictus (winter tick): 135910008
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Entry
135910008 CDS
T11267
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dalb
Dermacentor albipictus (winter tick)
Pathway
dalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135910008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dalb03041
]
135910008
Enzymes [BR:
dalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135910008
Spliceosome [BR:
dalb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135910008
Complex B
135910008
Complex C
U2 SnRNP specific factors
135910008
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
MscL
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
135910008
NCBI-ProteinID:
XP_065298063
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All DBs
Position
1:complement(332430459..332463900)
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AA seq
880 aa
AA seq
DB search
MFHKGGEGRPKGFGFGSFAVSSKKPDSQLGRSALQPETTPVPALPVVNRRGYTGLSTITQ
NALDINYGNLRKRPKTEEEYFEQDEEDGRGGQLAYIPAPGSPTWDEQQRREKQQDSSESE
EDPLDAFMADIEKKLSKDKKPSLSKNSKMPEKETKSKDELKGVRDDIENEDDEESYYRYI
EENPNAGADKDDSDIELEYDEDGNPIAPVKSKYIDPLPPIDHSTIEYKEFTKNFYEEHKE
IAALSDAEVDQLRTTLGVKVTGAIPPKPVTSFGHLGFDEAMLKAIRKAEYTQPSPIQAQG
VPVALSGRDMIGIAKTGSGKTAAFIWPLLTHIMDQRELAPGEGPIGLILAPTRELAQQIY
LEAKRFGKVYGVAAACCFGGGSKWEQSKALQEGAEIVVATPGRMIDMIKMKATNLERVTF
LVLDEADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKRKVERLARDVLTDPIKVVQGD
VGEANEDVTQIVLVMPSNPPTSKWNWLTTHLVEFTSVGSVLIFVTKKANAEELANNLKAH
DHNVGLLHGDMEQNDRTKVIASFKKKEFPILVATDVAARGLDIPHVKTVVNYDIARDIDT
HTHRVGRTGRAGEKGVAYTLIMDKEKEFAGHLVRNLEGASQHVPQQLMDLAMQSQWFKKS
RFKQGSGKKLNVGGHGLGFRTRERPGLGCANSSGGLQRQAPAAGPMSGLGSYTASVLSGP
RFVAASGNKTSSDIGASSNVTSSTSMPRHGAGPQTDRLSSMRAAFQAQYKSQFTAATDTS
WKLGLPRSPPRRPPSPPRHTPFTPPVPFAVPSPVHFTSPASKTEAHRDSQGNDSSTRPHS
QDSLSQPRSFGTDSVQQQGQQPSGTSKEERRKNRKSRWDC
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacaaaggcggcgaagggcggccgaaaggttttggcttcggaagtttcgcggtt
tcatcgaagaaacccgattcccagcttggtcgcagcgctttgcaaccagaaacgacacct
gtgcccgccttgccggttgttaaccggcgtggctacactggcttgagcaccataactcaa
aacgctttggatatcaactatggaaatcttcgcaagcggccgaagaccgaagaagagtac
tttgaacaggatgaggaagatggccgtggagggcagttggcatatatacctgcccctgga
agccctacatgggatgagcagcagcgtcgggagaaacagcaggattcctctgagagcgag
gaggaccctttagatgctttcatggctgatattgagaaaaaactgagcaaagataagaaa
ccatcgttatccaagaacagcaagatgcctgaaaaggaaaccaaatcaaaggatgaactg
aagggtgtccgtgatgacatagaaaatgaagacgatgaagaatcctactatcgttacatt
gaagagaaccctaatgcaggagcagacaaggacgacagtgacattgagctggagtatgat
gaggatggcaatccaattgcccctgtcaagtcaaagtacattgatccactgccacctatc
gaccactcaaccatcgagtacaaggaattcaccaagaacttctatgaggaacataaagaa
atagctgcactcagtgatgctgaagtggatcagttacgaacaacgttgggcgtaaaagtg
acaggagctattccaccaaaacccgtgacgagcttcggtcacctgggatttgacgaagcg
atgctcaaggctatccgcaaggcagagtacacccaaccctcacccatccaagcacaggga
gtcccagttgcactgagtggcagagacatgattggcattgccaagactggctcaggaaaa
actgccgctttcatctggcccctcttgacacacataatggatcagagggagcttgcacca
ggagaaggtcccattggcctgattttagcaccaaccagggagctggcccaacagatttat
ctcgaagccaagcgcttcggcaaggtgtatggtgtagctgctgcctgttgttttggtggt
ggcagtaagtgggagcagtccaaggcactccaggaaggcgctgagattgttgtcgccacc
cctggtcgcatgattgacatgatcaaaatgaaagccactaacctggagcgtgttacattc
ttggtgctggatgaagcagaccgcatgtttgacatgggctttgagccccaagtgcgttcc
atctgtgaccatgttcgtcctgacaggcagactctcatgttcagtgctacattcaagcgt
aaggtggagcggcttgcacgtgatgtgcttacagacccaatcaaagtggttcagggtgat
gtgggagaagctaatgaagatgtgacccaaattgtgcttgtgatgcccagcaacccacca
acgtccaaatggaactggctcaccacacacttggtggaattcacctcagttggcagtgtt
ctcatcttcgtgaccaagaaggccaatgcagaggagctggcaaacaatctcaaagctcac
gaccacaatgtgggtcttctacatggagacatggaacaaaatgacagaaccaaggtgatt
gcttctttcaagaaaaaggagtttcctattcttgtggctacagatgttgctgcacgtggt
ctggacatcccccatgtgaagactgtggtgaactatgacatcgctcgtgacatcgacacc
cacacgcacagagttggcaggactggccgtgcaggtgaaaaaggggtggcatacacgctg
atcatggacaaggagaaagagtttgctggccacctcgtgcgtaacttggaaggggccagc
cagcatgtacctcagcagctgatggaccttgccatgcagagccagtggttcaagaaatcg
cgcttcaaacaaggcagtggcaagaaactcaacgtgggaggccatggacttggtttcaga
acaagggagcggccaggccttggctgcgccaacagtagtggtggactccagaggcaggct
cctgcagctggacctatgtctgggttgggcagctatactgcaagtgtgctctcaggaccg
aggtttgtggctgcttcaggaaacaagacttcctctgacattggtgccagcagtaacgtg
acctcatccacctccatgcctcgccacggggccggtcctcagacagacaggctgtcctcc
atgcgggcagcttttcaggctcagtacaagtctcagttcacagcagctacagacacttcg
tggaagctcggactgccacgttcaccaccccgtcgaccaccttcgccaccacgccacaca
ccgttcactcctcctgttccatttgccgtaccttcaccagtgcatttcacgtcaccagcc
tccaagaccgaggcacatcgagattcacaagggaatgactcgagcactcgtcctcattct
caggacagtttgagccagcctagatcttttggcactgactctgtgcagcaacaaggacag
cagccgagtggcacatctaaagaggaaaggcggaagaacaggaagtcacgctgggattgt
tag
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