Dermacentor albipictus (winter tick): 135910515
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Entry
135910515 CDS
T11267
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135910515 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135910515 (fand)
03041 Spliceosome [BR:
dalb03041
]
135910515 (fand)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135910515 (fand)
Spliceosome [BR:
dalb03041
]
Complex B
Other components
Prp19-related factors
135910515 (fand)
Complex C
135910515 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_8
TPR_2
Mad3_BUB1_I
TPR_12
TPR_15
ARM_TT21_C
ARM_TT21
DHR-2_Lobe_A
TPR_10
PPR
TPR_16
Motif
Other DBs
NCBI-GeneID:
135910515
NCBI-ProteinID:
XP_065298648
LinkDB
All DBs
Position
1:complement(157962035..158060557)
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AA seq
845 aa
AA seq
DB search
MKSTKDIVFEEDDLPYEEEIIRNPFSVKHWIRYIDYKKDQPKHVINLICERALRELPGSY
KLWYNYLKLRRQQVRDLCITDPEYEDVNSAFERSLVFMHKMPRIWMDYCKFLTLQQKITR
TRRVFDRALRALPITQHPRMWPLYLEFVNMHDIPETALRVYRRYLKLCPENAEEFVEYLT
RIGRLDDAAVLLADIVNKEDFVSKEGKSKHQLWNELCDMISKNPDKVHSLKVDAIIRGGL
RRYTDQIGQLWNSLADYYIRAGLFERARDIYEEAIQTVLTVRDFTQVFDAYAQFEESVLC
AKMEETSKSKPNEESDLDLELRLARFEDLMDRRPLLLNSVLLRQNPHNVHEWLKRVKLFE
GKPREIINTFTEAVQTIDPKLATGKLNVLWVSFAKFYEENDQIEDARIIFEKATQVPFTK
VEDLAHVWCEWAEMELRHENHEGALKLMQRATAMPSRKAAYHDQSEPVQFRVYKSLKVWS
LYADLEESFGTFKSAKAVYDRIIDLKIATPQIIINYGLFLEENNYFEEAFKAYEKGIALF
KWPNVFDIWNTYLTKFLKRYGGTKLERARDLFEQCLEGCPSKFAKSLYLLYAKLEEEHGL
ARHAMAIYDRGCKAVLPEEQFEMFNIYILKAAEIYGLTHTREIYERAIELLPDTQARLMC
VRFADLERKLGEIDRARAIYAHCSQMCDPRTTADFWNTWKEFEVHHGNEDTMREMLRIKR
SVQAMYNTQVNFMTAQMLSATAREAAAAAGTEEAPKDSMQQLEAAAKLLADEARKDTPRM
PGKDILFVRGGTTEDEQSLAERSRTTNPDEISIDDEEGSDDDQQVQEVAVEQRSVPEEVF
GDLKK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaccaaggatatcgtatttgaggaagacgatcttccgtacgaggaagagatc
attcggaacccgttctccgtcaagcactggatacgctacattgactacaagaaagatcag
ccaaagcatgttatcaatttgatctgcgaaagagctttacgagagcttcccggcagctac
aagctttggtacaactatttgaaactaagaaggcagcaagtcagagatctctgcataact
gaccctgagtatgaggatgtcaacagtgcttttgagcgatcattggttttcatgcataag
atgccccgaatatggatggactactgcaaatttctcaccctgcaacagaagattacacgc
acacgacgagtgtttgacagggccctccgggctttgcctatcactcagcatcctcgcatg
tggccactttatttggagtttgtcaacatgcacgatattcccgaaacagctcttcgtgtt
taccgccgctaccttaagctctgccctgagaatgctgaggaatttgtggaatacttgact
cgcatcggtcgcttggatgatgctgctgtactactggcagacattgtcaataaggaagac
tttgtgtctaaggaaggaaagtctaaacatcagctgtggaatgagttgtgcgacatgatt
tccaagaaccctgataaagtgcactcactcaaagtggatgccattattcgaggtgggctt
cgccgttacacagaccagattggccagctttggaattccctggctgactactacatccgt
gctggactgtttgaaagagcaagagacatttatgaagaagcaatacaaacggtcctgact
gttcgggacttcactcaggtttttgatgcctatgcccagtttgaagaaagcgtgctctgt
gctaaaatggaagaaactagcaaatcaaagcccaatgaagaaagtgatcttgaccttgaa
ttgcgtcttgcacgttttgaggatcttatggatcgaagaccactcctgctgaacagtgtc
ttgctgcgacagaatccgcacaatgttcacgagtggctgaagagagttaagctctttgaa
ggaaagcctagagagataatcaacactttcaccgaggctgttcaaaccattgaccccaag
ctagccactggaaaactgaatgttttatgggtgtcttttgccaagttttatgaagaaaat
gatcagattgaagacgctcgaattatttttgaaaaagcaacccaggtgcctttcacaaaa
gtggaagacctcgctcatgtatggtgcgagtgggcagagatggaactacgacatgaaaac
catgaaggggctctaaaactaatgcagagagcgactgcaatgccctccaggaaagctgcc
taccatgatcaaagtgaaccagttcaatttcgtgtgtataaatcactcaaagtgtggtca
ctgtatgcggacttggaggaaagttttgggacatttaagtctgcaaaggctgtgtatgac
cggatcatcgatttgaagattgccacgcctcagatcatcatcaattatggtctctttttg
gaagaaaacaactattttgaggaagcatttaaggcctatgaaaagggtattgcactgttt
aagtggcccaacgtctttgacatctggaacacatacctgaccaagttcctgaaacgttat
ggtggcaccaaactagagcgggctcgtgatctttttgagcagtgcctcgaaggttgccca
tcaaaatttgctaagtctttgtatcttctttatgccaagctggaggaagagcatggtctt
gcacgccatgctatggccatctatgatcgtggctgcaaagctgtgcttcctgaagaacag
tttgaaatgttcaatatatacatcttgaaagctgctgaaatatatgggctgacacatact
cgtgaaatctatgaacgagcaattgagcttcttccagacacccaggctcgactcatgtgt
gtgcgctttgctgaccttgagcgaaagttgggtgaaattgaccgtgctcgagccatatat
gcacactgcagccaaatgtgtgatccacggacaacagctgacttctggaacacatggaag
gagtttgaggtgcatcatggaaatgaggacaccatgagggagatgctacgcattaagcgc
agcgtacaggccatgtataacacccaggtcaactttatgacagctcaaatgctgagtgca
actgccagggaagcagcagctgcagcaggcactgaagaggctccaaaagactcgatgcag
caattggaagcagctgctaagttgttggctgatgaggcaaggaaggacactccaaggatg
cctggcaaggacatcctttttgtcaggggtgggaccacagaggatgagcagagtctagca
gagcggagccgcaccacaaaccctgatgaaatcagcatagatgatgaagaaggctccgat
gatgaccaacaagttcaagaggtagctgtggaacaaagatccgttccagaggaagtcttt
ggtgaccttaagaaatag
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