Dermacentor albipictus (winter tick): 135911621
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Entry
135911621 CDS
T11267
Symbol
Nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135911621 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135911621 (Nup188)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135911621 (Nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
135911621
NCBI-ProteinID:
XP_065300020
LinkDB
All DBs
Position
5:121722081..121798080
Genome browser
AA seq
1675 aa
AA seq
DB search
MADIQRSIKDLWVIISGNTLLRSNELVGTELTKNADQVLNGLLYFTDQRKSKTTVPESFN
QELLSKLSTLLGLDKERSYELFCSYLIYEYRGTPDDLKATVASERNIPHILNEVWNYYRM
ERLFSLFCLRYILEHWQNPSHVYVRLFDGFLERFNENEIIIKKIIEQLDLIVEIQQPSRE
SHGPYMTNTLIGQWVNYTLQEQCELLKIVLLYYKDIQPKLENIIQLLDVFQKHNFGQRRS
FRKLLGDSHRPMLDLISYLECLVLIESLDLDWLHRCHQDSKMTDHQLLKDPDALQQLDRS
MSCLGGNPAHGPLLLSWLLVRSWILPGTRTAGLGKEALRMDAFGYLNSALRHPAFFGDGI
LPNKVHAIVYELIILLVESFNHRSLGPIEPLFHLAEKLLEYPTVAQDFWKEGETSGLGHL
LVEAEEMFPLKAEPLIQMLAALARASPESSHNVITRFGGVPCFLEPLDSVPSDVLQVAED
GLRVSLRTTRYPYGIHALSIPFGTEGTMFKSGNSSLVRWRVKINGWQVIVCELCKPCDSD
KGWLQRLLHIARLIRSLLETDSSLEDLLVHNIDELFAALHRLILLSTPLMSPPIEVLGEC
LEVVAILADKSPKKSWKRLVATGLLPALSTQPKSVEQLVKGYMVTGNVLSQAMASQERVI
GDHPVCLAFLKLLAAVAETFVETVDEDFLACLAVVLQDIFPSFHKWRYNRPHDKDVIGHR
CLNIFHRLVTVSAKLKAETVGSTELCVYGLLHGESCSALLRLIVSAEEFVARAVEFEGSR
HSKDLLNSVRLCFSVLNRLLLLGAGAGSPLEQRLLVSPSQTAGGAPSLTVSVARFLYLRF
DPRLCTLAVQLLKRIAKLYPMSLLACLGRDAESFRDQLLLRLSKDTEDVRLKVALLQLLA
VCTRTQPGLFELLLGTTTPSPTSTPSSSSSGSSGDASLSSSGLGLCLGEVLQILKTKQEG
VDYCPADLHCSCIEFIHSLWACHQLRAMELLRKNKSFWSLVCFPLMGEAVATQECRLVAF
IFKTLALELYQSKSELDPNVKAVLDKAKQGAPIKAWSKLVTSGLPKQPGGGGSLNASAMS
IADVSEMFDPVADSFVLLSGWRDFCVILAKCRHMQIASAEKKAILQDLFSSLVTDGVLPN
FKISILLGELYLILLKHWSSGVTSTVSEWASSMGTVLCILENGTTSLHPRLALVLSAIGA
SMVKILKQQLTANKEEHELNVHSWVASLCPLLTFYGRKCVEEGLKSPSSLSVQVCTTLTT
FLKDLLSLSENNTGCIPVLQQNLVVAQLTNLLQASLQAMKDSRLAQAICHFFLALTAIPQ
MAEALQCCGLMDQVSPFLSACYQGSDEGWLTVYRLLVQLVTALLHMQRYFFLDSALGFMA
LHVDRLYACLMQVRSNPTQIEEALVTSWLVCKVASLRTMYPCNQTNPLMMLMRSICCVTS
SAVAYLCRPTLLQHMLEYKKQSTAQPHSEEQGSQPRRQLSTDDVADPSPKLTEARKKLQE
LLFICLCCCKQFSPSVPEALSDQALDIDEWRPIAHLSFQSPSVEQEENLTFGTLMSAAQL
CLKSLTKVDRQPSTAGSPRQQRLVEFATLEMSLSIALGQALLYRLHPAVALHDKQLLSRT
FSGEMAAIKAEVQRHLRRGGQGSPSTSRTKTPPLDPVSEWALVQTFIDVVEQVFK
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattcaaagatcgatcaaggacctctgggtcatcatttccggaaacactctt
ctcagatcaaacgaattggttggcaccgagctcacgaaaaatgccgatcaagttctcaat
ggacttctttacttcactgaccaaaggaagtccaagacgaccgtgcctgaaagctttaac
caggaactgctttccaagcttagcactcttctcggattggacaaagagcgcagttatgaa
ctgttttgttcttacctaatatacgagtatcgaggcaccccagatgacttgaaggcaaca
gtggcgagtgagcggaatataccccacatactaaatgaggtgtggaattactatcgcatg
gaacgcctattcagcctgttttgcttgagatacattcttgagcactggcagaacccttct
catgtctatgtgagattgttcgatggatttttggagcgcttcaatgaaaatgagataatc
atcaaaaagattattgagcagttggatttgatagttgaaatccagcagccctcaagagag
tctcatggaccttacatgacgaacactctgattggtcaatgggtcaactacacactgcaa
gaacaatgtgagcttttaaagatcgtcctgctctactataaggatatacagccaaagctg
gaaaacattattcagctcctcgacgtgtttcagaagcacaactttgggcagcgacgttct
ttcaggaagcttctaggtgacagccacaggcccatgctcgaccttataagttacttagaa
tgccttgtgctcatagagagccttgatcttgactggctacatcgatgccaccaggatagc
aagatgacagaccatcagctgctgaaagatccggatgcactgcagcaactagaccgcagc
atgtcctgtctgggtggaaacccagcccatggccccttgctgctctcatggcttctcgtt
cgctcctggatcctgccgggcactcggacagccggactgggaaaagaggctctccgtatg
gacgcctttggctatctcaacagtgcactgcggcaccccgctttctttggggatgggatc
cttccgaacaaggttcatgccattgtctacgagctcatcattctcctggttgaatcgttc
aatcatcgcagccttggtcccattgagccactgtttcatcttgcagagaagcttcttgag
tacccaactgttgcccaagacttctggaaggagggtgaaacttctggactaggccatctg
cttgtcgaagcagaagaaatgtttcccttgaaggcggaaccactaatccaaatgctagct
gcattagctagggcaagccctgagagctcgcataatgtaataaccaggtttggaggtgtg
ccttgctttttggaacccctggacagtgtgccaagtgacgtgttgcaggttgccgaggat
ggcttgcgtgtttcgctaagaacaactcgatatccctatggcatccatgcactgtccatt
ccatttgggacagaagggaccatgttcaaatctggaaatagctcacttgtccggtggcgg
gtgaagattaatggctggcaagtcattgtctgcgaactctgcaagccctgtgactcggac
aaaggctggcttcagcggttgctacacatagctcgccttatccgcagccttttggagacg
gactcatcactagaagacttgctggtccacaatatcgatgagctttttgctgcactgcac
aggctaatactgctgagcactcccctgatgagccctccaattgaagtactgggagaatgc
cttgaggtggtagccatcttggctgataagagtcccaaaaaatcctggaagcggctggtc
gcgacgggtctgcttcctgcactgagcacgcagcccaagtctgtggaacaactcgttaaa
ggctatatggtcacaggcaacgttttgagtcaagccatggcatcccaagaaagggttatc
ggagaccatcctgtctgcctcgcctttctgaagcttcttgctgctgttgctgagacattc
gtggagactgtggatgaagatttcctggcatgcttagctgtggtgctgcaggacatcttt
ccctcatttcacaagtggaggtacaacagaccacacgacaaggacgtcatcggccatcgc
tgcctaaatattttccaccgattggtgaccgtctccgctaagttgaaggcagaaactgta
gggagtaccgaactctgtgtatatggcctgcttcacggcgagtcatgttcagctttgctt
cggcttatcgtctccgctgaggaatttgttgcacgggctgttgaatttgaaggaagtcgc
cactcgaaagacttgctcaactcggtgcgactgtgcttctcggtactgaaccgcctgctg
ctgctgggcgccggtgcaggctcccctctggaacagcgcttgctggtgtcgcccagccag
actgctggtggcgcaccatccctgaccgtctctgtggcacgctttctgtacctgcgcttt
gatccgcgtctctgcacccttgccgtgcagctgctgaagcgcattgccaagctgtacccg
atgtccctgctggcatgcctggggcgtgatgcggagagcttccgcgaccagctgctgctg
cggttgagcaaggacaccgaggacgtgcgtctcaaggtggccctcctgcagctcctggcg
gtgtgcacccgcacccagcctggattgtttgagctgctcctgggcaccaccactccgtca
ccgacgtcgacgccctcctcctcctcctctggttcctctggtgatgcctcattgagctct
tcaggtttgggtttgtgcttgggcgaagttttacagatcttgaagacaaagcaagagggt
gtggactactgtcctgcagacctgcactgctcgtgcatcgagttcatacacagcctgtgg
gcgtgccaccaactgcgggccatggagctgctgcgcaagaataagtcgttctggagcctg
gtgtgttttcccctgatgggagaggctgtggcgacacaggaatgcaggctggtggccttc
atcttcaagacactggctttggagctttaccagtccaaaagtgaacttgatcccaacgtg
aaagccgtcctcgacaaggcgaagcagggggccccaataaaggcctggtctaagcttgtg
accagcggcttgcccaaacagcctggaggtgggggaagcctgaatgcctcagccatgagc
attgctgatgtcagtgaaatgtttgaccctgttgctgatagctttgtgctgttgtcaggg
tggcgtgacttctgcgtgatccttgccaagtgtcgtcacatgcagattgcatcggcagag
aagaaagccattctgcaggacttgttttccagcctggttaccgacggtgtcctgccaaat
ttcaagattagcattctgcttggtgaactttacctcatactactcaagcattggagcagt
ggcgtcacgtctacggtatcggaatgggctagcagcatgggcaccgtgctctgcatcctg
gaaaatggcaccacatcgcttcatccccggctggctcttgtgctaagcgccattggtgct
tccatggtgaagatactgaagcagcagctgacagccaacaaagaggaacatgagctgaac
gtgcattcatgggtggcatctctgtgtcctctgctaaccttctatgggaggaagtgtgtt
gaggaaggcctcaagtcaccaagttctctctcagtccaggtgtgtaccacgttgaccacc
ttcctgaaggatctcctgtcgctttctgagaacaacactggctgcatccctgtacttcag
cagaacctggttgtcgcccagctgacgaacctattgcaggcatcactacaggcaatgaag
gacagtcgcctagcccaagccatctgccatttctttcttgcactcacggctatacctcag
atggccgaggcgctgcagtgctgcggactgatggaccaggtgagcccattcctgtcggct
tgctaccagggcagcgacgagggctggctgactgtgtaccggctactggtgcagctggtg
acagcgctgctacacatgcagcgttacttctttctcgacagtgccctggggttcatggcg
ctgcatgtggaccgactctatgcttgccttatgcaagtccgttccaacccaacacaaatt
gaggaagccttggtaacatcttggcttgtctgcaaagtggcttctctacggactatgtat
ccgtgcaaccaaacaaatcccttgatgatgctcatgagaagcatctgctgcgtgacgtct
tcagcagttgcctacctgtgcagacccacccttctgcagcatatgcttgagtacaagaag
cagtctaccgcccaacctcattctgaagagcagggcagccagcccaggcggcagctttcg
accgacgatgttgctgatccatcacccaagctgacagaagcgagaaaaaagctccaggag
ttgctgttcatctgcttgtgctgctgtaaacagttcagtccaagcgtgcctgaagcccta
tcagatcaggcgttggacattgacgagtggcggccgatagcccacctgtcatttcagtca
ccatcagtggagcaggaggagaacctgacatttggaaccctcatgtcagctgcgcagtta
tgcctcaagtcacttactaaggtcgaccggcaaccatccactgctgggagccctcgccaa
cagaggcttgtggaattcgccaccctggagatgagcctgtcaatagcgctcggccaggcc
ctgctgtatcgactgcatccagcggttgccctccatgacaagcagcttttatccaggacg
tttagtggcgagatggctgctatcaaggctgaagtgcagagacatttgcggcgaggtggc
cagggctcaccaagcacgtccaggacaaagaccccgcccttggacccagtctccgagtgg
gccttggttcagacatttatagacgttgtagagcaggtgttcaagtga
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