Dermacentor albipictus (winter tick): 135913571
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Entry
135913571 CDS
T11267
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135913571
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_13
LRR_NLRC4
SoxA-TsdA_cyt-c
LRR_5
LRR_EndoS
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
135913571
NCBI-ProteinID:
XP_065302151
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Position
9:115204996..115330009
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AA seq
706 aa
AA seq
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MRKLSKSKSGGDKAASSSIGGGSHDATALRLASYRGGEAAVSVPSSTESPKVSPSSPEDD
HGASSSEPVAAAAPGQRIMSGLDQPSTSRGDVVKRASCCCHVECCGGGDASTGTNEDSGR
DVSPMSPPSPLPPTPQEKKLSSGSLGSGDAARPKQVTVTHPGTTKPKPTSKKKGSIQADL
LYAQCHSSSQRIMAGVKFKMDEWLNNLSNKVKTDVSKELCRCRDQGATRLDLSKSSITVL
PSSVRELSHLEEFYLYGNKLATLPDELGSLIHLETLALSENSLTTLPDTLANLKQLRVLD
VRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLSLRENKIRELPAGIG
KLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTIGNLMVLSRFGIRYNQ
LTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSRNNFSSYPSGGPAQFT
TVTSINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTNQLS
KIPDDIQYLACLEVLTLSNNLLRRLPTTIGNLNALRVLDLEENRLDSLPNEIGHLRQLQK
LVVQSNQLTNLPRAIGYLSNLTYLSVGENNLNQIPEEIGTLENLESLYINDNPNLHSLPF
ELALCTNLQIMSIENCPLSQIPAEIVNGGPSLVIQYLKMKGPYRTL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagttgtccaagtccaagagcggcggtgacaaggctgcgtcgtcgtccatcggc
ggcgggtcccacgacgcgacggcgctgcgcctagccagctaccgcggcggggaagcggcg
gtgtccgtgccgtcgtcgacggaaagccctaaggttagtcctagctcgcccgaggacgac
cacggggcgagttcgtcggaacctgttgccgcggcggcaccgggacagcgcatcatgagc
ggtctcgaccagccgtcgacgagccggggagacgttgtcaagcgagcgtcttgctgctgc
catgtggaatgctgtggcggaggggatgcctctaccggcaccaacgaggacagcgggcgg
gacgtctctcccatgtcgccaccgtcacccttgcccccaacaccccaggagaaaaagctg
agctcagggtcactcggaagcggcgatgcagcgaggccgaaacaggtgactgtcacgcat
cccgggacaacgaagcccaagccgacgtccaagaagaagggctctatccaagctgatctc
ctgtatgcacagtgccacagctcgtcgcagcgcatcatggccggggtgaaatttaagatg
gacgagtggctcaacaacctctcgaacaaggtcaagacggatgtatccaaggagctctgc
cgctgtcgggaccaaggtgccacacgcctggacctcagcaaatcgagtatcacggtactg
ccgtcgtcagtgcgggagctgagccacctagaggagttctacctgtatggcaacaagctg
gcgacgctgcctgacgagttgggcagcctgatccacctggagacgctggcgctgtccgag
aactccctcaccaccctgccagacaccctcgccaaccttaagcaactacgtgtgcttgac
gtccgacacaacaagctcaacgagatccccgaagttgtgtacaagttgacatcgctgacc
acgctgttcctgcgcttcaacaggatacgagaagtcagcgagaacatagccaatttaacg
aatttgacgatgctgagcctgcgggagaacaagatccgggagcttccagcgggcataggc
aagctgacgcaactggtcaccttcgacgcttccaacaaccacctcaagcacctgcctgcg
gagattgggaactgtgtgcagctgtcgacgctcgatgtccagcacaatgagcttgtggac
ctgcccgacacgataggcaacctcatggtgctttcccggttcggcataaggtataatcag
ctgacagccgtgccaaagtccctgagcaattgtgtcctcatcacggacttcaacgtcgag
agcaacttggtctcccaactacccgaaggacttttagcgagcttcacaaatctgcacacc
ctcactttgtcacgaaacaacttctcttcgtacccatcggggggaccggcccagttcacc
acagtcacctccatcaacatggagcacaaccaaataaacaagatcccctttgggatcttc
tcacgtgccaagcacctgtccaagctcaacatgaaggagaaccagctcacgtcactaccc
cttgacctgggcacatggacgaccatggtggagctgaacctgggcacgaaccagctgagc
aagatccccgacgacatccagtacctggcgtgcctggaggtgctcaccctcagcaacaac
ctgctgcgacgcctgcccaccaccatcgggaacctgaacgcgctgcgcgtgctcgacctc
gaggagaaccgcctggacagcctgccaaacgagatcgggcacctgcggcagctgcagaag
ctggtggtgcagagcaaccagttgaccaacctgccgcgtgccatcggctacctgagcaac
ctcacctacctgagtgtcggcgagaacaacctgaaccagattcccgaggagattggaacc
ctggagaacctggagtccctgtacatcaacgacaacccaaacctgcacagcttgcccttc
gagctggccctgtgcaccaacctgcagatcatgagcatcgagaactgccccctgtcgcag
atacccgccgagattgtcaacggcgggccctcgcttgtcatccagtacctcaagatgaag
gggccctaccggacgctgtga
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