Dermacentor albipictus (winter tick): 135914363
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Entry
135914363 CDS
T11267
Symbol
Sym
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135914363 (Sym)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
135914363 (Sym)
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135914363 (Sym)
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135914363 (Sym)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
135914363 (Sym)
U7-dependent histone pre-mRNA processing factors
135914363 (Sym)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
TetR_C_29
DUF7879
RGS12_us2
Motif
Other DBs
NCBI-GeneID:
135914363
NCBI-ProteinID:
XP_065303240
LinkDB
All DBs
Position
7
Genome browser
AA seq
1186 aa
AA seq
DB search
MATKKKALEMRRSTAAQFFMDEEQVEQKSTSERVVELINFAALNQSIKDHHKVNNLRQVQ
ELIVYKEPDLLDNFLDEMLAFQNDRSSEVRKFVVGFIEEACKQDPDIFPKVLANLRMMFR
DEAVAVQKRVIQATTQLYKVALRWICQAKKVDDLMETSWEYIKSLKNDIVSLLDCDNDGI
RTHTIKFMEMLVILQTYPDGDSPKKTANDFALDDVPLTLKIIKPRKLEEEAKQVFDALVV
FHGTPHISSINLMTCMQALVLIAKHRSEFMSRVIQALESLHANLPPTLAKSQVSSVRKHL
KLQLLILMKHPAAVDYHGQVSTLLTDLGATPQEISKSMPKPEEIKKRARLIEEGITAAPG
SAAAPPSVKRIKLEAEEEEEEKEEEDTSTISKAATNTAIDITAEDLVPRLTTVNVTDIVL
VSMLSLPETMPAHFQASYTPIAVAGTETQIKHLARLISTQMTAAGLGKGVEEMIAKAKEQ
QLQEEEAMQTDEAAQPKQTIQTLLGGTTADAKKKEAKNTVLVPTGFEGKSRRLRQLNLAD
ITRPLSEEEMTQMLVSTVRRILDAGRESKALNTSISPVQVKILAGLATQFGGEISAMLKE
YILEDLRSHVDIALAWLYEEYAQLQGFLQGGTVNPMEKCTSSDSYVHCLTNLLMDILQKC
ETRDRDALFSRFFLEIPSITSEALIILKQYCQNESTVSNGLSILRSLVDYRPPGQIEYLQ
KLLELTVSQNQEVRLQAAKHAKQLHERGNFRPIIEDFALMYLRYLLEPSPPQHLFHGCPI
WTEDNTKICMQLYINLLPVNHKLIHDLAVVYVGAIAEIKRTILRGLEGPVKGMGMSSPEL
LLLVENCPKGAETLVTRIIHILTDKTPPSSELVARVRDLYHKRVSDVRFLIPVLNGLSKK
EVIAALPKLIKLNPIVVKEVFNRLLGSHARHAKYLESTATFTSPVSPAELLVALHNIDPS
KCDVKTVIKATSLCFAEKHIYTQEVLAVVMQQLMEQSPLPTLLMRTVIQSLSLYPRLLGF
IMNILQRLITKQVWKQKKVWEGFIKCCQRTKPQSLQVLLQLPAEQLRNVFQVSPDLQQPL
VQHVSAFTDHQKAHIPESILEVLNLSRPKSESDKSKSAEKDKESSKSIALKMKRESSRES
RDSREARDSRDYGSSRSERDSWRPSSNTKIRLATSEDGGGSQELDL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagaaaaaagcgcttgaaatgcgccgcagcaccgcggcgcagttttttatg
gacgaagagcaagttgaacagaagtccaccagcgaacgggttgtcgaactcatcaacttt
gctgcattaaatcaaagtattaaggaccatcataaagtaaacaaccttcgtcaggtacag
gagctcatcgtctacaaggagccggacctacttgacaacttcctcgatgaaatgcttgcg
ttccaaaatgatagatcatcggaggtccgaaagtttgtcgtgggattcatagaggaggca
tgcaaacaagatccagacatcttcccaaaggtcttggccaatctgcgcatgatgtttcgg
gatgaagcagttgctgtgcagaagagggtcattcaggccaccacacaactgtacaaagta
gcattgcgatggatatgccaggccaagaaagttgatgacctcatggaaacatcttgggaa
tacatcaaaagcctcaagaacgacattgtctctcttctggattgtgataatgacggtatc
cggactcatactatcaagtttatggaaatgctagtcatactgcaaacttatccggatggt
gacagtccaaagaaaacagcaaatgattttgctctcgatgatgttccgttgacactgaag
atcatcaagcctcgaaagctagaagaagaagcaaagcaagtttttgatgcgcttgttgtg
tttcacgggacaccacacatctcaagcatcaacttgatgacctgtatgcaagctcttgtg
ctcattgcaaagcacaggtcagagttcatgtcaagagtcatccaggcactagaatcgctt
catgctaacctgccaccgacattagccaagtctcaagtgagcagtgtacgaaagcatctc
aagcttcagttacttatcctcatgaagcaccctgctgccgttgactatcacggccaagtt
agcacactcctaaccgaccttggagcaacacctcaggagatctcaaagagcatgcccaaa
ccagaagaaatcaagaagcgagcacgcctcatcgaggagggcataacggctgcacctgga
agtgccgcagcaccaccaagtgtcaagcgaataaaacttgaggctgaagaagaggaagaa
gaaaaggaggaggaagacacctcaacaatatcgaaggcagccaccaacacagccattgac
attactgctgaagatttggtgccgcggctgacaactgtgaacgtcaccgatatcgtcctt
gtgagcatgctttcactgccagagacgatgcctgcacacttccaagcatcctacactccc
attgctgtagcaggcacagagacccagatcaagcacttggcaaggctcatctcgactcag
atgactgccgcgggcttgggcaagggagttgaggagatgatcgccaaagccaaggagcag
cagctgcaagaggaagaggccatgcaaacggatgaagcagcgcagccaaagcagacaatt
cagacactcctaggtggaaccacagcagatgccaagaaaaaagaggccaagaatacagtt
cttgttcccacaggctttgagggaaaaagccgaagactccggcaactcaacttggcagac
atcacacgacccctttctgaagaggaaatgacccagatgctcgtttccacagttcggagg
attcttgatgctggccgtgaatcaaaggcactcaacaccagcatatcaccagtccaagtc
aagattcttgctggattggcaacccagtttggaggagaaatcagtgcaatgctgaaggag
tacatcttggaggaccttcgctcgcacgtcgacatcgccctagcttggctgtatgaggag
tatgcgcagttgcaggggttcctgcagggcggcacggtgaatcctatggaaaagtgcacc
agcagtgactcatatgtccactgcctaaccaacttgctcatggacatcctgcagaagtgc
gagacacgagaccgggatgcgttgttcagccgcttctttctggagataccatccatcaca
tcagaagcactcataattctgaagcagtactgccaaaatgagtctacagtgtccaatggg
ctgtcgatcctgagatcactggtggactaccggcctccaggacagattgagtacctgcag
aaactgcttgaactgaccgtctctcagaatcaagaagtgcggctacaggcagcaaagcat
gccaagcagctgcacgaaaggggcaactttaggccaatcattgaggactttgcattgatg
tacctgaggtaccttctggaaccatcacctccccagcacttgttccacggctgtccgatt
tggaccgaagacaacaccaagatctgcatgcagctgtacataaaccttctgcctgtcaat
cacaagctgatccatgaccttgctgttgtgtacgtgggtgccattgctgaaatcaagagg
accattctccgtggccttgaaggacccgtcaaaggcatgggaatgtcctccccagagcta
ctgctactggtagaaaactgcccaaaaggggcggagacgctcgtcacccgcatcatccac
attctcaccgacaaaactccaccatcatcagaattagtggccagggtcagagacctttac
cacaagcgtgtgtctgacgtgcggttcttgataccagtgctgaacggcctttcaaagaaa
gaagtgatagcagcactccccaagctgatcaagctgaatcccattgttgtaaaagaagtt
tttaatcggctacttggtagccatgcccgacatgcaaaataccttgaatcaacagcaacc
ttcacaagtccagtgtctcctgctgaactgctggtggccctacataacattgatccttcc
aagtgtgatgtcaaaacagtcatcaaagcaacatccctgtgttttgcggagaagcatatc
tacacgcaagaggttctggcagtggtcatgcagcagctgatggagcagagccccctgccc
accttgcttatgcgcactgtcatccagtctctcagcttgtacccaaggctgttgggcttc
atcatgaacatcttgcaacgactgatcaccaagcaggtgtggaagcagaagaaagtatgg
gagggcttcatcaagtgctgccaacggaccaagccacagtcactgcaggtgcttctgcag
ctgcccgctgagcagctgcgaaacgtgttccaggtcagccccgaccttcagcagccactg
gttcagcacgtcagtgccttcaccgaccaccagaaagcgcacataccggagtctattttg
gaggtgctcaacctgagcaggcccaagtcggagagtgataagtcaaagtcagcagaaaaa
gataaagaatctagcaagtctatcgccctaaagatgaaaagggagtcgtctcgagaatcc
agagattctagagaagccagagattcaagggattacggcagcagccgctcagaaagagac
agttggcgaccttcaagcaacaccaagatcaggctggcaacatcagaagatggaggggga
tcccaagaacttgacttgtaa
DBGET
integrated database retrieval system
