Dermacentor albipictus (winter tick): 135917873
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Entry
135917873 CDS
T11267
Symbol
Cpsf100
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135917873 (Cpsf100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135917873 (Cpsf100)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135917873 (Cpsf100)
U7-dependent histone pre-mRNA processing factors
135917873 (Cpsf100)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
135917873
NCBI-ProteinID:
XP_065307557
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Position
10:complement(10054009..10107539)
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AA seq
738 aa
AA seq
DB search
MTSIIKLHAISGVQDESPQCYLLQVDEFKFLLDCGWDEFFSLQAVKEMKKHASQVDAVLL
SFPDCGHLGALPYLVGQCELKCPIYATVPVYKMGQMFMYDLFQSRHNMEDFTLFTLDDVD
AAFDKIIQLKYSQTVNLKGKGQGLSITPLPAGHMIGGTVWRIVKDGEEDIVYAVDFNHKK
ERHLNGCALETISRPSLLITDCYNANYAQARRRTRDEQLMTNILQTLRNGGNVLVAVDTA
GRVLELAHMLEQLWRNQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKVMRSFEGARN
NPFQFRHLQLCHGMAELARVPEPKVVLASMSDMECGFSRELFIQWCSSPRNSVVLTSRSA
PGTLTRQLIENPHQQSLTITVKKRVRLEGSELEEYMRKEKELAAARHKAERDTELDASDS
SEESEDDMDIDEKKPLPEPKGEAKSKSMGFFKQAKKSYLMFPVKEEKIKWDDYGEVIRPE
DFVVVDKTAQEEEADEKKADDDDLMQDVTEVPTKCLESSLQLDVNASLQFIDFEGRSDGE
SVRKIVQMMKPQRVILVRGSPEATQAMAAFCRSSGSVQGRVFTPRLGEVVDATTESHIYQ
VKLRDSLVSSLQFARAKNAELAWLDGEIATEEHLAPDGTRDESIDEDENRDSMYILQPLP
PSQVPGHATIFVNELKLSDFKQVLLRNGVQAEFSGGVLYCNGIVAVRRNEAGRINIEGCL
CEDYFKVREILYQQYAII
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattatcaaactgcacgccatttcgggcgttcaagatgaatcgccgcagtgc
tacctcttgcaagtggacgaatttaagttcttgctcgactgtggctgggatgagttcttc
agcttgcaagctgtcaaagaaatgaaaaagcatgcaagccaggtggatgcagtacttctt
tcatttcctgactgtggacacctgggggcactgccatacttggtggggcagtgtgagctc
aagtgccccatctatgcaactgtccccgtttacaagatgggccagatgttcatgtacgac
ctgttccagtcacgccataacatggaggactttactctttttaccctcgacgatgtcgac
gctgccttcgacaaaatcattcaactcaagtacagccaaacagtcaatctgaaaggtaaa
ggccagggcctctccatcactccgcttccagccggtcacatgatcgggggcacagtgtgg
cgcatagtcaaggatggcgaggaggacattgtgtacgcggtggacttcaaccacaagaag
gagcggcatcttaatggctgtgctctcgaaaccatcagccggccatctctgctcatcacg
gactgctacaatgcaaactatgcacaggcacgccgaaggacgcgtgacgagcagctcatg
accaacattctccaaaccctgcggaacggtggcaacgttctagtggccgtcgacaccgct
ggccgtgtcctcgaactggcccacatgctggaacagctctggcgcaaccaggattctggc
ctgatggcgtactctctggccctcctaaacaatgtcagctacaatgtggttgagtttgcc
aagtcacaggtggagtggatgagcgacaaggtgatgcgctccttcgaaggtgcgcgcaac
aaccccttccagttccgacacctccaactttgccacggcatggcagaactcgccagggtc
cccgagccaaaggttgttctagccagcatgtcagacatggagtgcggcttctcgcgggag
ctcttcatccagtggtgcagcagcccgcgcaacagcgtggtgctcacaagtcgatcggcg
cccggtacgctgacacggcaactcatcgagaatccacaccagcagtcactcactatcacg
gtcaagaagcgtgttcgcttagaaggttccgaacttgaagaatacatgcgcaaggagaaa
gagctggccgcagcacggcacaaagctgaacgtgacacggaactggacgcttctgactca
agtgaagaaagtgaggatgacatggacattgatgagaagaagccactgcccgaaccaaaa
ggagaggcaaaatccaagagcatgggcttcttcaagcaggccaaaaagtcgtacctcatg
tttccagtgaaggaagagaaaatcaagtgggacgactacggagaagtaatacggcccgaa
gactttgtggtcgtcgacaagacggcgcaggaggaagaggccgatgagaagaaggcagac
gatgacgacctcatgcaggatgttacagaggttccgaccaagtgcctggagagctctctg
cagttggatgtgaacgcttcactgcagttcatcgactttgagggccgctcggacggcgag
tcggtgcggaagatagtgcaaatgatgaaaccacagcgggtaatactggtgcgcggtagt
cccgaggctacacaggccatggctgccttctgccgatcgtcgggctctgtccaaggccgc
gtgttcaccccaaggctaggggaggtggtagatgcaacaaccgagtcacacatctaccag
gtgaagctgcgcgactcgctagtgagctccctgcagtttgcacgagccaagaatgctgag
ctggcttggctggacggcgagattgcgacagaggagcaccttgcccccgacgggactcgt
gacgagagcatcgatgaagacgagaatcgtgacagcatgtacatacttcaaccattgcca
cccagtcaggtaccgggacacgcaaccatctttgttaacgaactcaaactctcggatttc
aaacaagtgcttcttcgcaacggagtccaagctgaattctccggtggagtcctgtactgc
aacggcatcgtggcagtgcgaaggaatgaagccggccgaatcaacattgaaggttgcctg
tgcgaagactacttcaaagtgcgcgagatcctctaccagcagtatgccatcatctag
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