Dermacentor albipictus (winter tick): 135918875
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Entry
135918875 CDS
T11267
Symbol
Polr1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135918875 (Polr1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
135918875 (Polr1A)
Enzymes [BR:
dalb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135918875 (Polr1A)
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135918875 (Polr1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF5770
Motif
Other DBs
NCBI-GeneID:
135918875
NCBI-ProteinID:
XP_065308636
LinkDB
All DBs
Position
9:124385499..124690174
Genome browser
AA seq
1759 aa
AA seq
DB search
MDLEKIPHRFVDSISFSVFSTEELLRQGVLEVTCSETFDIVGHPTKGGLHDALLGPSDRD
EVCATCGLGFTHCPGHIGYIRLPLLVFNPVFLRTLYQLLRGSCFSCHRLLSPPVACQVAL
AQLQVLQYGAVGAVQELQDIANETLTDDDDKGRLVHRGVVRPVLQRRIEQSVASVIDSVG
DVEEARRAADVKNVVECRQRIVKTFIREHLMGAPRKCPHCGELRRAMTIQNNSRFVYTSK
IRPAVKPPTSSMPFRRTYNGFEDEDDMLVEEEEERQAQQKQAEEEAAGGALSYLTPVEAR
AHLRELWTKERSLLQNLFGILALASGSHESPVDMFFLEALVVPPTRFRPMNFMNGRKYEN
AQTVSLSRVLQCCDTLRAVLKLLARRGSDQSERPEDQMETERLEQLMSKTMGKDLDAKMH
FAWNALQVAVNVVVDSELDRLNTNKGTPGIKQILEKKEGLFRKHMMGKRVNYAARSVISP
DPYIDVEEIGVPMVFATKLSYPEPVTDRNIAELRRAVINGPDIYPGALLVEREDGVVMRL
DPTNRTRREAVAKQLLTPTEAHQHMLRRCKTVHRHLRSGDMLLLNRQPTLHKPSIMAHRA
RVLPGERTLRLHYANCKCYNADFDGDEMNAHLPQSPLAQAEATEVASVNRQYLVPKDGTP
LSGLIQDHVIGGSLLTMQGRFFTREDYNQLVFGALTFVKMAIKLLPPAVQKPQALWTGKQ
VLSTVLLNCIPHGKPPPTVEGKAKIPAKAWSKGGEAEANMTEGDVVIRDGELLCGILDKA
HYGPTQFGLVHVCYELYGGATSSLVLSAFARLFTHYLQTFTGFTLGIEDILVTDKADRKR
KRIMKKAKMQGDAVAVKALGLENEEELDAVQLEDRLRAAHMARNDRQMKQLDSSMKGVTD
DVNNQINKACIPDGLLKKFPSNNLQLMVQSGAKGGMVNCMQISCLLGQIELEGHRVPLML
SGRTLPSFLHYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYLQR
CLIKHLEGLMVCYDQTVRDSDGSVIQFQYGEDGLDVLKMQMLKPSQFPVLIKNSQAVINR
EDIEQCARATDHDKLHKLKRAVRKWRNKMDRDADTRTSRRQSAFTLFSQTQGSLVREEHF
SRFHNGTSETARQAILEAYFNLDERTRHKLNKSTMKCADPVCSKLRSDVHLGAVSERLDT
LIEDYIEKNPHGLVLAEDSGEGQAMEKKTVTADDFRKMVYIRNMKAICDPGEPVGLLAAQ
SIGEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMVASANIATPTMDLHLLPQPDIEQR
AEELRVKITSVNLSQVLEEVSVKEMLHVKGRSERYRRYRVHFQFLPRRAYRKKLQATPAR
ILRYMETTFLRRLIDSIKRKMEQVSSERMTRTTKARERRGEEAASAEDASMAPPRPEADE
GGESSDEGEGDGDTVAHQASARHAQEREYEEAEEEERIAVESDEELLDGAENVPATERAL
SSAEEGATSDDILVSLQEVVRDEKAEKLKQARIFSVVKYNTWVLEYDYDDAKEEWCTFTF
QLELKGSKFDFTSLVEEESAKAVFHSVPSITRAFLVKDTKDKSGCGKMLQTEGVNFVEMF
RYGEIIDLKRIYSNDIHAIANTFGIEAARTAIAREVANVFAVYGIEVDPRHLLLVADYMT
FDGSYRACNRIAMESNASPLQQMTFETTMNFLKSATLAGAEDHLNSPSARLVVGRVVPLG
TGCMQLRQPPVPSFKLRSR
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaaaaaatccctcaccgcttcgtggacagcattagctttagcgtgttcagc
accgaagaactgctgcgccaaggcgtgctcgaagtcacttgctccgaaacttttgacatc
gtcggacacccgaccaaaggtggcctccacgatgccctgctcgggcctagtgaccgtgat
gaagtctgtgccacctgtggccttggcttcacgcactgcccaggccacattgggtacatc
aggctacccttgctcgtgttcaatcccgtgttccttaggactctctatcagttgcttcgg
ggcagttgcttctcctgccaccgtttactttcgcctccggttgcctgccaggtggcactg
gcgcagctgcaggtgctccagtatggggctgttggtgcggtgcaagaactgcaggacatt
gccaacgagaccctgactgacgacgacgacaagggtcggctggtccaccgcggagttgtt
aggcctgtgcttcagcggcgcatcgagcagagtgtagcgtcggtcatcgacagtgttggc
gatgtggaagaggctcgtcgcgcagcagatgtgaagaatgtcgtcgagtgcaggcaacgg
atcgtgaagacgttcatccgtgaacatctgatgggggcaccacgtaagtgcccacattgc
ggtgagttgcgccgagccatgaccatccagaacaacagccgctttgtgtacaccagcaag
atccgacccgcggtgaagccacctacctcgtccatgccttttaggcgtacgtacaatggc
tttgaggacgaggatgacatgttagtcgaagaagaggaggagcgccaagcccagcagaag
caggctgaggaagaggcggcgggcggggcgctctcctacttgacacctgtcgaggctcgt
gcccacctgcgagagctgtggaccaaggagcggtcgctgctacagaacctgttcggcatc
ctggccctcgcgtccggctcgcatgagagtcccgttgatatgttcttcctcgaggcgctg
gttgttcctccgacacggtttcgcccgatgaacttcatgaatggccgcaagtacgagaat
gcgcagacggtaagcctgtcacgggtgctgcagtgttgtgacaccctgcgagcagtgctc
aagctgcttgcgcgcaggggctcggaccagtctgagcggccagaagaccagatggagacc
gagcggcttgagcaactgatgagcaagacgatgggcaaggacctggacgcgaagatgcac
tttgcctggaatgcgctacaagtggcagtcaacgttgttgtggacagcgagctcgatcgg
ctcaacaccaacaaaggcacaccgggcatcaagcagatcctggagaagaaagagggactc
tttcgcaagcacatgatgggcaagcgcgtcaattatgcggcccgctcggtgatctcgcct
gatccctacattgatgtggaggagattggtgtgcctatggtgtttgccaccaaactgtca
tacccggagccagtgactgatcgcaacatagctgagctgcgaagagcggtcatcaatggc
ccggacatttatcccggggcgctgctggtggaacgggaggatggcgtcgtgatgcgactg
gacccgaccaaccgtacgcggcgggaggcagtggccaagcagctgctgactccgacggag
gcacaccagcacatgctgcgtcgctgcaaaactgtgcatcggcacctgcgatctggtgac
atgctgctcctgaaccggcagccgacactgcacaagcccagcatcatggcgcacagggca
cgcgtgctgcccggggagcggaccctacggctgcactatgccaactgcaagtgctacaat
gccgactttgacggagacgagatgaacgcgcacctgccacaaagtcccctggcgcaggcc
gaggccactgaggtggccagtgtcaaccggcagtacctggtgcccaaggacggcacgccg
ctcagtggcctcatccaggaccatgtcattgggggctcgctcctgaccatgcaggggcgc
ttcttcaccagagaggactacaaccagctcgtctttggagccctgacttttgtcaagatg
gccatcaagctcctgccaccggccgtccaaaagccacaggcactatggacaggcaaacag
gtgctgtcaaccgtcctgctcaactgcataccgcatggcaagccacctcctacggttgaa
ggcaaggccaaaattccagctaaggcgtggtcaaaggggggtgaagctgaggcaaacatg
actgagggtgatgtggtcattcgggacggtgagcttctctgtggcatccttgacaaggcc
cactatggtccaacccagtttggtctggtgcatgtctgctacgagctttatggaggtgcg
acgtccagcctggtactgagtgcctttgcaaggctcttcacgcactacctgcagactttc
actggattcacgcttgggattgaagacatcctggttaccgacaaggctgacaggaagcgc
aagcgtatcatgaagaaggccaagatgcaaggcgatgcggtggctgtcaaggcccttggc
ctggagaatgaagaggagctggatgctgtccagctggaagaccggctgagggcagcgcac
atggcacgcaatgaccgacagatgaagcagctcgactccagcatgaagggcgtcaccgac
gatgtcaacaaccagatcaacaaggcctgcattccagatggcctgctgaaaaagtttccc
agcaacaacctacagcttatggtgcagtctggagccaagggtggaatggtgaactgcatg
cagatctcgtgcttgctgggccagattgaactggaagggcaccgtgtgccacttatgctc
agtggtcgtacattgccatcctttctgcattatgacacatcaccacgggcgggtggcttt
gtggacggccgctttctgacgggcatccggccgcaggagtatttcttccactgcatggct
ggacgtgagggtctggtggacacggctgtgaagaccagccgcagtggctacctgcaacgt
tgcctcatcaagcacctggaggggctcatggtctgctacgaccagactgtcagggacagc
gatggaagtgtcattcagttccagtatggagaggatggcttagatgtgctcaagatgcag
atgctcaagccaagccagttccctgtgctcatcaagaacagccaggcagtcattaaccgt
gaggacatcgagcagtgcgcacgggccaccgaccacgacaaactgcacaagttaaagaga
gcggtgcgcaaatggaggaacaaaatggacagagatgctgacactcgcacgtctcgcaga
cagagtgcatttaccctcttctcgcaaacccaagggtcgctagtgcgggaagagcacttc
agccgatttcacaatggaacttccgagacggctcgccaggcgatcttggaggcttacttc
aacctcgacgaaaggacacgtcataagctcaacaaatccactatgaagtgtgcagaccca
gtgtgttccaagctgcgcagtgacgtccacctcggtgccgtgtctgaacggctggatact
ctaatcgaagactacatcgagaaaaatcctcatggcctcgtcttggccgaggattcggga
gaagggcaagccatggaaaaaaagactgtgactgcggatgacttccggaaaatggtctac
atacgaaacatgaaagccatctgtgacccgggcgagccagtaggcctgttggctgctcag
agcattggcgagccctcgacacagatgacactgaacacgtttcactttgcgggtcgaggc
gagatgaacgtgactctggggatcccgcggatgagggagatcctcatggtagccagtgcc
aacattgcgaccccaaccatggacctacatttgctaccacagccagacattgagcagcgt
gctgaggagctacgagtcaagatcacatctgtcaacctttcacaggtgctcgaggaagtg
tctgtcaaggaaatgctacacgtcaagggaaggtcagagcggtatcgccggtatcgcgtc
cactttcagtttttgcctcggcgagcataccgcaagaagctgcaggctacaccggcacgc
atactgcgctatatggagaccacttttctccggaggctcattgattccatcaagcgcaaa
atggagcaggtctcctcagagaggatgacacgcacgacaaaagctcgagaacgtcgtggg
gaagaagctgcttcagcagaggatgccagcatggcaccaccacgtccggaagctgacgaa
ggaggcgagagctcggatgagggcgaaggggacggtgacacggttgcccaccaggcttct
gcacgccatgcccaggagcgggaatatgaggaagccgaggaagaggaacgcatcgctgtt
gaatctgacgaagagttgcttgacggtgctgagaacgtgccagctactgaacgtgctctg
tcgtcagctgaagagggcgccacatccgatgacatcctcgtctcactccaggaggtcgtt
cgcgatgagaaggctgagaagctgaagcaagccaggattttttcagttgtgaagtacaac
acttgggttctggagtatgactatgacgacgccaaggaggagtggtgtacgtttacgttc
cagcttgagcttaaagggagcaaatttgacttcacctcgctggtggaagaagagtctgca
aaagcagtgttccattccgtgcctagcattacacgggccttcctagtcaaggacaccaag
gacaagtcggggtgtggaaagatgctgcagacagaaggggtcaactttgtggaaatgttc
cggtacggtgaaataatcgatctgaagcgcatctacagcaatgacattcatgccattgcc
aacacttttggcattgaagctgcaagaacagcgattgctagggaggtggccaatgtgttt
gccgtgtatggcattgaggtggacccaaggcacctgctgcttgtcgccgactacatgaca
tttgacggcagctaccgtgcctgcaaccgcatagccatggagagcaatgcctcgcccctg
cagcagatgaccttcgagaccaccatgaactttctcaagtcagccacgcttgccggtgct
gaagaccacctcaactccccatccgcccggcttgtggtgggcagggtggtgcccctgggc
acgggttgcatgcagctacggcagcctccggtccccagcttcaagttgcgctcacgctaa
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integrated database retrieval system
