Dermacentor albipictus (winter tick): 135919353
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Entry
135919353 CDS
T11267
Symbol
cbc
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135919353 (cbc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
135919353 (cbc)
Enzymes [BR:
dalb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
135919353 (cbc)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
135919353 (cbc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
AAA_16
MMR_HSR1
AAA_22
nSTAND3
AAA_35
ATP_bind_1
AAA_24
nSTAND1
Motif
Other DBs
NCBI-GeneID:
135919353
NCBI-ProteinID:
XP_065309184
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All DBs
Position
1:321107628..321147005
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AA seq
448 aa
AA seq
DB search
MNQLAQIKLLLPTKFWFLETLPIMSEEKETKEEAAQEFRIDPESELRFEVEGKEKVTVEL
KSGLAEIFGVELVKNKKFTFGPGAKVAVFTWHGCTLELSGKTEVAYVAKETPMIFYANIH
AVLEQMRQKCEEDDSKGPTVLVVGPTDVGKSSLCRILLNYAVRQSRRPIFVDLDVGQGHI
SIPGTIAAILVERPADVEEGFSQQAPLVYHYGHSTPGTNATLYNVLVSRLAEVISQRAES
NKKASVSGIIINTCGWVKGAGYKAITHAALAFEVDVVLVLDQERLYNELVRDMPGFVKVV
FTPKSGGVVERSKSMRSESRDSRVREYFYGFRTPLYPHSFDIKFSDIKLYKIGAPSLPDS
CMPLGMKAEDNFTKLVPVPLGPNVLHHILSLSFATSSDEDILQTNVAGFICVTEVDMERQ
TLTVLSPQPRPLPKGVLLLSEIQFMDSH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaactcgcccaaatcaagttgttgcttccaacgaagttttggtttctggagaca
ctgcccataatgagtgaggagaaagaaaccaaagaagaggccgcacaggaattccggatt
gacccggagtctgagctccgctttgaagtagagggaaaagagaaggtcaccgttgagctg
aagtctggcctcgctgaaatatttggtgtcgagctggtgaaaaataagaagtttacattt
ggacctggagccaaagttgcagtgttcacgtggcatggatgcacgctggagctctctgga
aagacagaagtcgcctatgtagctaaggaaacaccgatgatattctatgccaacatccac
gcagtacttgaacaaatgcgacaaaagtgtgaagaggatgattccaagggacccacagta
ttggttgttggacccacagatgtcggcaagagcagtctctgtcgaatactcctaaattat
gcagttcgtcaaagtcgacggccaatctttgtggaccttgatgtcgggcagggccacata
tctatacctggaacaattgcggcaattttggtggagagaccagcagatgttgaagaaggc
ttttctcagcaggcccccctcgtctatcattatggccatagtactccagggaccaatgcc
acactgtacaatgttcttgtttctcgacttgcggaggtcatcagccagcgtgctgagagc
aacaagaaagctagcgtcagtggcatcatcattaacacctgtggttgggtgaaaggagct
ggctacaaggctattactcacgctgctcttgcttttgaagtggatgttgtcctagtgctg
gatcaggagcggctgtacaacgaactagtcagagatatgccaggtttcgtcaaagtggtg
ttcacaccaaagtctggaggtgttgtagagcgcagcaagtctatgagatcagaatccagg
gattcgagggtgagagagtacttctatggcttcaggacacctctgtatccacactctttc
gatatcaaattttctgacatcaaactgtacaagataggtgcaccatctttacctgactcc
tgcatgccactaggcatgaaggctgaggacaacttcacaaagctagtacctgttccactg
ggaccaaatgtgctgcaccacatactgagtctcagctttgcaactagcagtgatgaggat
attctacagactaatgtggctggctttatctgtgtaacggaagtggacatggagcggcaa
acactgacagtactctcaccacaaccaaggcctctgccgaagggagtgttgctcttgagt
gaaattcagttcatggattcacactga
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