Dermacentor albipictus (winter tick): 135919369
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Entry
135919369 CDS
T11267
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135919369 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dalb03041
]
135919369 (Sf3b1)
03036 Chromosome and associated proteins [BR:
dalb03036
]
135919369 (Sf3b1)
Spliceosome [BR:
dalb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135919369 (Sf3b1)
Complex B
135919369 (Sf3b1)
Complex C
U2 SnRNP specific factors
135919369 (Sf3b1)
Chromosome and associated proteins [BR:
dalb03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135919369 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
DUF1428
DUF2298
Motif
Other DBs
NCBI-GeneID:
135919369
NCBI-ProteinID:
XP_065309206
LinkDB
All DBs
Position
1:320814541..320876057
Genome browser
AA seq
1331 aa
AA seq
DB search
MAAPPVSTEDIEAQIRDIQARKAGVGKQGNYDNGEGVPLTASANGAYMDEDIYGHTQSKY
DGYVTSIAANDDADADEDDYESTGLMQTKKMPLPSAFLAELTDKDYDPFADRRVPRIADR
EDQYRAQRRKLMISPERVDPFADGGKTPDMKSRTYTVIMQEQALTKDQAELRRKLADKAK
AGELQTVPSNGEAKQAAPAVKRRRWDQAGDETPQTPAKKKSSWDAAESSHTPSHARWDET
PGRAKGSETPGATPGYSSTRMWDPTPAHATPGHATPGHETPGGTQKGAAPGTPSARRNRW
DETPKTERETPGHGSGWAETPRTDRTGGADLIQDTPTPSASKRRSRWDETPSSQMGNQTP
QTPSAMTPSSTMTPSGVTPTGAKAMAMATPTPGHIMAMTPEQLQAYRWEREIDERNRPLT
DEELDAMFPPGYKILQPPAGYVPIRTPARKLTATPTPLGGAGAGIPGAGPGFFFQKEEPV
KLADSQPKGNLPPLKPEDLQYFDKLLAEVDEELLSPEEQKERKIMKLLLKIKNGTPPMRK
AALRQITDKARELGAGALFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHK
ILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFA
VVASALGIPALLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLRALVEIIEHG
LVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYL
IPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKEEVLPH
FFKHFWNHRMALDRRNYRQLVDTTVEIANKVGAAEIVNRVVDDLKDENEQYRKMVMETIE
KILGNLGATDIDSRLEEQLIDGILYAYQEQTTEDMVMLNGFGTIVNALGKRVKAYLPQIC
GTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSI
LGALKGIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVPAR
EWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLRVQERQNRVCTT
VAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGRDYIYAVTPLL
EDALMDRDLVHRQTACAAIQHMSLGVYGFGCEDALVHLLNYVWPNIFETSPHLVQAFMGA
VEGLRLALGPIKILQYCLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYARVPDDGRN
NYIRHELDYIL
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccaccagtgtccaccgaagacattgaggcgcagatccgcgatatccaggct
cgtaaggcgggcgtgggcaagcagggcaactatgacaatggtgaaggtgtgcccctcaca
gcaagtgccaatggcgcttatatggacgaagacatctatgggcacacacagagcaagtac
gacggctatgtcacatcaatcgcagccaacgatgatgctgatgcagatgaggatgactat
gaatccacagggctcatgcagaccaagaagatgcctctaccatctgccttcttggcagaa
ctcacagacaaggactatgacccgtttgcggatcgccgggtaccccgcattgctgatcgt
gaagaccagtatcgggcccagcgacgaaaactcatgatctcaccagaacgtgtggatccg
tttgcagacggcggcaagacgccggacatgaagtcaagaacttacactgtgatcatgcag
gaacaggctctcacaaaagatcaggctgagctgcgtcgcaaactggctgacaaagccaaa
gcaggagaactgcagacagtgccgtccaatggtgaagccaaacaggctgcacccgccgtg
aagcgcaggcgctgggaccaggctggcgatgagacgcctcagacgcctgccaagaaaaag
tctagctgggatgctgctgagtcatcgcatacgccatcacatgcccgctgggacgagaca
ccaggcagagccaagggttctgagacaccaggagcgacaccaggttattccagcactcgc
atgtgggaccctactccagcccatgctacaccaggtcatgccacacctggtcatgaaaca
ccaggaggcacacagaagggtgctgcacctgggactcccagcgcccgccgaaatcgctgg
gacgaaacacccaagacagagagagaaactccgggccatggcagtggctgggctgagaca
cctcgtacagaccgcactggtggagctgacctgatacaggacacgcccacaccgagtgcg
tccaaacggcgttctcgttgggatgagactccatcatcacagatgggcaatcagacacct
cagacaccatcagccatgacgccttcttccaccatgactccgtcaggggttacacctaca
ggtgccaaggcaatggccatggctacacccacaccgggacacatcatggccatgacgcca
gaacagctccaggcttaccgctgggagcgggagattgacgagcgaaaccgcccactcact
gatgaggagttagatgccatgttcccacctggctacaaaattctccaaccgccagccggg
tatgtgcccatacgaactccagcgcgcaagctcacggccacacccacaccacttggggga
gcaggtgcaggaattccaggcgcaggtccaggctttttcttccaaaaagaggaaccagtg
aagctggctgacagccagccgaaaggaaacttgccccctttgaaacccgaggacttacag
tactttgacaaactccttgccgaagtggatgaggagctgctaagccccgaagagcagaag
gagcgcaagatcatgaagctgctgctaaagatcaaaaatggcacgccacccatgcgcaaa
gctgcactccgacaaatcacagacaaggcacgagagttgggcgctggtgcgcttttcaac
cagattctcccattgcttatgtcacccacgctggaagaccaagagcgtcatctccttgta
aaggttattgatcgtgttctgtacaaacttgacgaccttgttcgtccttatgtgcacaag
attcttgtcgttatcgagcctctccttatcgatgaggactactatgctcgtgttgagggc
cgagagatcatttccaaccttgctaaagctgctggcctggcaaccatgatctccaccatg
agacccgacattgataacattgatgagtacgtccgaaacacaacagcccgtgcgtttgct
gtggttgcctcagcgctgggaattccagcgttgctccccttcctaaaagctgtctgtcgc
agcaagaaatcgtggcaagcgcgccacacaggcatcaagattgtccagcagattgccatc
cttatgggttgtgccatcctgcctcacctgcgtgctcttgttgagatcatcgagcatggt
ctcgtcgatgaacagcagaaagtgcggactatcacagctctggctcttgctgcacttgct
gaagcagcaacaccttacggcattgagtcttttgactctgtgctcaagcccctttggaaa
ggtatacgaacacatcgaggcaaaggtctggctgcgtttctgaaggctattggctatctc
atcccattgatggacgctgagtacgccaactactacacaagggaagtgatgctgatcctt
attcgagagttccagtctcctgatgaggagatgaagaaaattgtgctcaaagtagtgaag
cagtgctgtgctacagatggtgtggagccccagtacattaaggaggaggtgttgcctcac
ttcttcaaacatttttggaaccaccgtatggcattggacagacggaattacagacagctt
gttgacacgacggtggagattgccaacaaggtgggtgcagctgagatagtgaaccgggtg
gtggatgatctgaaggatgaaaacgagcagtaccgcaagatggttatggaaacgatagag
aaaatactgggcaacttgggcgccaccgacattgactctcgattggaagagcagctgatc
gatggcatcctctacgcctaccaggagcagacaacggaggacatggtaatgctgaacggc
tttggcaccattgtgaatgcactgggcaagcgggtgaaggcatacctgccccagatttgt
ggcaccattctgtggcggctgaacaacaagtcggccaaggtacgccagcaggcagctgac
ctgatctcgcgcatcgctgtggtgatgaagacgtgccaggaggagaagctcatgggccac
ttgggtgtggtgctgtacgagtacttgggtgaagagtaccctgaagtgctgggctccatt
ctgggggcactcaagggcattgtcaacgtcatcggcatgcacaagatgaccccacccatc
aaggatttgttaccccggttgacaccaatccttaagaatcggcatgagaaggtgcaggag
aactgcatagacttggtcggtcgtattgccgatcgtggtgccgagtatgtgcctgctcgt
gagtggatgcgcatctgctttgagctgcttgagctgctgaaggctcacaagaaagccatc
cgacgagccaccgtcaatacctttggttacatagccaaggctattggtccccacgatgtg
ttggccacgctcctcaacaacctgcgtgtccaggaacgacagaaccgagtgtgcactaca
gtggccattgccattgtggcagaaacatgctcccccttcacagttttgcctgccctcatg
aatgagtaccgggtacccgagctgaatgttcagaacggtgtgctcaagtccctctcgttt
ctcttcgagtacatcggggagatgggccgcgactacatctacgctgtcacaccactactt
gaggatgccctcatggacagggatctggtccatcgacagacagcatgtgcggccatccag
cacatgtctctgggcgtgtatggttttgggtgtgaagatgccctggtgcacctgctgaat
tatgtgtggccaaacattttcgagacatctccgcacttggtgcaggcatttatgggtgcc
gtggagggactgcggctggccctgggacccatcaagatcctccagtactgcctccagggc
ctgttccatccagcccggaaagtgcgagacgtctactggaaaatctacaacagtttgtac
attggagggcaagatgccctggttgctggttatgctcgtgtgccggatgatggacgcaac
aactacattcgtcacgagttggactatatcctgtga
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integrated database retrieval system
