Dermacentor albipictus (winter tick): 139047324
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Entry
139047324 CDS
T11267
Symbol
tex
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03013
Nucleocytoplasmic transport
dalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139047324 (tex)
09122 Translation
03013 Nucleocytoplasmic transport
139047324 (tex)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
139047324 (tex)
03041 Spliceosome [BR:
dalb03041
]
139047324 (tex)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139047324 (tex)
Spliceosome [BR:
dalb03041
]
Complex C
Other components
EJC/TREX
139047324 (tex)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139047324 (tex)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
eIF2A
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
RMC1_N
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_RFWD3
Tricorn_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_ACSF4
PD40
WD_LRWD1
PROPPIN
WD40_like
Motif
Other DBs
NCBI-GeneID:
139047324
NCBI-ProteinID:
XP_070377247
LinkDB
All DBs
Position
7:complement(12896806..12904175)
Genome browser
AA seq
344 aa
AA seq
DB search
MAGALDADSVYKPMSVMAPNRSWNQQQSSHGQALTAFFQANSRVKDYQAHSSKVHSVNWS
CDGRRLACGSFDKTVSIFVLDKDRMAKDHVFKGHGDSVDQLCWHPSNPDHLATASLDKTV
RLWDARTQKSIAVVGTKGENINICWSPDGQTIAVGNKEDLVSFIDVRSHKVRTDQQFKFE
VNEISWNNTNTHFFLTSGQGCIHILSYPDLQLQTVLNAHPANCICIEFDPTGKYFATGSV
DALVSLWDVQELACLRTFSRLEWPVRTISFSHDGKMLASASEDLLIDIADVETGEKIFEV
PCESPTFTIAWHPKRHLLAFACDDKGERDQDAGTVKLFGLPSSS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgctcttgatgctgatagtgtttataaaccgatgagcgtcatggcgccgaat
agaagctggaaccagcagcaatcgagccacggtcaagcacttaccgcgttcttccaggcc
aatagccgcgttaaggattaccaggcccactcttccaaagttcactccgtcaattggagt
tgcgatggccgccgcctcgcctgcgggagcttcgacaaaaccgtcagcatcttcgtcttg
gacaaggatcgcatggcgaaggatcatgtcttcaagggtcacggagatagcgtcgaccag
ttgtgctggcacccttcaaaccctgaccacttggcaacggcaagtttggacaaaactgtc
cggttgtgggacgcacggacgcagaagtcgatagcggtcgttggcactaaaggagaaaac
attaacatctgctggtcacctgatggacagacgattgctgtgggaaacaaggaagatctg
gtgtccttcattgacgtccgatcacacaaggtccgcacagaccagcagttcaagtttgag
gtgaatgagatttcctggaacaacaccaacacacatttcttcctcaccagtggccagggt
tgcatccacatcctgagctatcctgacttgcaactgcagactgtgttaaatgcccatcca
gccaactgcatctgcatcgagtttgatccgacgggcaagtacttcgccacgggcagtgtg
gatgccctggtcagcctttgggatgtccaagagctggcctgccttaggacattctcgcgg
ttggagtggccagtgagaaccatcagcttcagccacgatgggaaaatgctggcatctgca
tcagaggacctgcttattgacattgctgatgtggaaactggggaaaaaatatttgaggtt
ccgtgcgagtcgcccacgttcacgatagcgtggcaccccaagcgccacctcctcgcattt
gcctgcgatgacaaaggggagcgggaccaagatgcaggaacggtgaagctcttcggcttg
ccaagttcgtcatga
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integrated database retrieval system
