Dermacentor albipictus (winter tick): 139047681
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Entry
139047681 CDS
T11267
Symbol
Vps39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb04140
Autophagy - animal
dalb04142
Lysosome biogenesis
dalb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
139047681 (Vps39)
04140 Autophagy - animal
139047681 (Vps39)
04148 Efferocytosis
139047681 (Vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dalb04131
]
139047681 (Vps39)
Membrane trafficking [BR:
dalb04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
139047681 (Vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
VPS18_solenoid_2nd
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
139047681
NCBI-ProteinID:
XP_070377695
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All DBs
Position
1:complement(62912100..62916264)
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AA seq
895 aa
AA seq
DB search
MYEAYTAIPLIKKMPLKVESVAAHGDKLYLGTKDGNLLVYTVVEKDSADGPKFFVHLGFS
NKVFAKKPITQLCVIPELNLLISLSDGSLSVHHLSLEPNTPPIDCPALAKCKGCTLFAVN
VQEKTTLTGEVKITLMLCAAVKRKLELFYWKNNTFCEHPQGLCVPDTPRSIVWCGDESLL
VGFRSEYNILQLSGETKQLFPTGKQPEPLCLKLKENSFALSRDDMTIFVNRDGLPTHKYA
VTWSEAPISLCYDYPYLLSAQSFGVEVRTVEPRALIQKVNFLKPRLLLPCKKGQLYVLAP
SGAVWCILRTPVQDQIPQVLKDKCFELALKLADLSDQSEEERNASKRHIQNLHAFDLFCK
KKFEESLNIFMDLETDPSHVIGLFPDLLPEDYRNSISYPDKVPDLRDADLEAGLYALVDY
LVQVRCKLLSDNQHEPALTGIVQGSKTVKSKKQLLQIIDTTMLKCYLETNVALVASLLRL
PDNFYHLDECERALKKHQKLSELIILYQQKNQHEKALDLLMREAHKADSPLKGHERTVGY
LQHLGRKHMELILRYSLWVLEEHPEEGLKIFVEDQQEKEGEALPRDVVLDFLSKKAPHLV
IPYLKHVIHKWNDQTEMFHNTLIHKYIESVRSLLSQQHSSVGPGEPGLVGELRKDLVDFL
ETSDRYTAENFPTHLLSDGLFEEAAVVMGKLGRHNEALEVYIYVLSDPSKAEQYCASQYN
RNPERNRDVFLILLQMYLQPPDEGSRVLDLCRRTAANIAGLPSPLPIPKGCREQNLKGAL
KILMDHVKEIDPLRALQMLPGDVRVEDVRGFLREVLDRCTKELHAAGLQRSLLFAEHLQV
KERCVRVKSLKITLTELDVCCVCQKRIGSSAFARYPDGAVVHYSCREGYESRLAS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggcctacactgcgatcccgctaatcaagaagatgccattgaaggttgagtcc
gtggctgcacacggagacaagctgtatttgggcacgaaggacggcaacctacttgtttac
accgttgttgagaaagatagcgccgacggtccgaagttctttgtccatcttgggttttcc
aacaaagtttttgcgaagaagccgatcacccaactgtgcgtcattcccgagctgaacttg
ctcatcagcttgtctgatggctccttgagtgtgcatcatctcagcctcgagcctaacacg
ccaccgatcgactgcccagctttggccaagtgtaagggatgcacattgtttgctgtcaat
gtacaggagaagactacgcttacaggcgaagtgaaaataactctcatgttgtgcgcggct
gtgaagcggaagcttgaactattctactggaaaaacaatactttctgcgagcatccgcaa
ggcttgtgcgtccctgacactccgcgatctattgtatggtgtggcgacgaatctcttctc
gttgggtttagatccgaatacaatatcctacagttgtctggcgagacaaagcaacttttt
cctacgggaaagcagccggaaccgctctgcttgaagctgaaagaaaatagcttcgctctc
agtagagacgacatgactattttcgtaaatcgcgatggcctgccaacgcacaaatacgca
gtcacctggtcagaggcgccgatctctctctgttacgactacccgtacctcttaagcgca
cagtcgttcggtgtagaggtgaggacagtggaaccgcgtgccctaattcagaaggtgaat
tttctgaagccgagacttctcctgccttgcaagaagggccagctgtacgttttggcacca
agtggtgcagtgtggtgcattctgcggactcccgtgcaggaccaaattccgcaagttctc
aaggacaagtgctttgagctggccttgaagctagctgatctgtccgaccagagtgaggag
gaacgcaatgcaagcaaacgtcacatccagaacttgcatgctttcgaccttttctgcaag
aagaaattcgaagagtccctgaacatctttatggatctcgagacagatccatcacatgtc
ataggccttttcccagatcttttgcccgaggactatcgtaattccatctcataccctgat
aaggtgcctgatctcagagatgctgatctagaggctgggctttatgcacttgtagactac
ttggttcaagtcaggtgcaagctgctttcagacaaccagcatgagcctgcacttactggc
atagtgcaagggagcaagaccgtaaagagcaagaagcaacttctacaaattattgacacc
acaatgctgaagtgctaccttgagaccaatgtggcactagtagcctcattgctgcgtctc
ccagacaacttctatcatttagatgagtgtgagcgtgctctcaagaagcatcaaaaactt
agcgagttgatcatactgtaccagcaaaaaaaccaacatgaaaaggcacttgatttgctc
atgagagaggcacacaaggcagattcgcctcttaaaggccatgaaagaactgttggctac
ctccagcacctaggtagaaagcacatggagctcatactgcgttactcattatgggttctt
gaagagcatccagaagaaggtctcaaaatttttgttgaagaccaacaagagaaagaaggt
gaagccttacccagagacgtagtgctcgacttcctgtctaaaaaggcacctcacctagtt
ataccttatttgaaacatgtcatccacaaatggaatgaccagactgaaatgttccacaac
acactcattcacaagtacattgaatctgtgcggtctctcctttctcagcagcattcctca
gttggtcctggtgagcctggtctggtgggggaactgcgcaaagacttggttgattttttg
gagacatctgacaggtacacagctgagaacttccccacacacttgttgagtgatgggttg
tttgaagaggcagctgtggtaatgggcaagctaggacgtcacaatgaagctcttgaggtc
tacatctatgtactaagtgacccgtccaaggcagagcagtattgcgcatcacagtacaac
cgtaacccagagcgcaatcgagatgtattcctgatcctgcttcaaatgtatttgcaacct
cctgacgaaggctccagggtgctggatctgtgtagacgtactgcagccaacattgcaggg
ctgccatcccccctgccgattcccaaaggttgccgtgaacaaaacttgaaaggtgcactc
aaaatcttaatggatcacgtgaaggaaattgacccattgcgtgccctccaaatgttgcct
ggggatgtgcgagttgaagatgttcgaggttttctccgagaggtcttagacagatgcacg
aaagagttgcatgctgctggtctacagagatcactgctatttgcagagcacttgcaagtg
aaagagcgttgtgtgcgtgtcaagtcactaaagataacactaacggagcttgatgtatgt
tgtgtatgtcagaagagaatagggagcagtgcctttgccaggtatccagatggtgcagta
gttcattactcttgcagggaaggctatgagtcgaggttggcatcttga
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