Dermacentor albipictus (winter tick): 139048071
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Entry
139048071 CDS
T11267
Symbol
Xpd
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03022
Basal transcription factors
dalb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139048071 (Xpd)
09124 Replication and repair
03420 Nucleotide excision repair
139048071 (Xpd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dalb03021
]
139048071 (Xpd)
03036 Chromosome and associated proteins [BR:
dalb03036
]
139048071 (Xpd)
03400 DNA repair and recombination proteins [BR:
dalb03400
]
139048071 (Xpd)
Enzymes [BR:
dalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139048071 (Xpd)
Transcription machinery [BR:
dalb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139048071 (Xpd)
Chromosome and associated proteins [BR:
dalb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139048071 (Xpd)
DNA repair and recombination proteins [BR:
dalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139048071 (Xpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_22
SNF2-rel_dom
AAA_11
NAMPT_N
PspAA
Motif
Other DBs
NCBI-GeneID:
139048071
NCBI-ProteinID:
XP_070378566
LinkDB
All DBs
Position
7:complement(91962739..92051509)
Genome browser
AA seq
759 aa
AA seq
DB search
MKIDVDGLSVFFPYDYIYPEQYSYMLQLKQCLDAKGHGVLEMPSGTGKTVTLLALILAYQ
KAFPAMVSKLLYCSRTMPEIEKVVEELRRLLEHYKQETGEEMSLLGLCLTSRKNLCIHPQ
VSLERDGRVVDGRCFSLTASYRRAQATDPATQCCSFFENFDAQGRDIPLPTGIYSVDDLK
EYGRVHQLCPYFVARQAVMHAKVVVYSYHYLLDPKIAEVVSKEMSRSAVVIFDEAHNIDN
VCIESMSVRLNKRTIEGSMENIDNLEHTIKELKEQDAEKLRTEYEQLLEGLREAREAREA
DLILANPVLPDEVLQEAVPGNIRLAEHFVAFLRRLLEYVKMRLRAQHMVQESPAAFLKDI
LQKVCLERKPLRFAAERLRSLLRTLEVPDPTNFSPLVRLCHFASLVSTYTKGFTVIVEPY
DERSPGVPNPVINLSCMDASLSIKPVFNRFQSVIITSGTLSPVEMYPKILDFRPVVSASL
SITLARPSICPLIVSKGSDQVALSTRFETRDEVSVVRNYGALLVELASCVPDGMVCFFTS
YVYLESVVAAWYEQGVLDQLQRRKLLFLETPDSAETALALANYVKACENGRGAVLLSVAR
GKVSEGVDFDHHLGRAVLMFGIPFVYTQSRILRARLEFLRDQFQIRENDFLTFDAMRHAA
QCVGRALRGKTDYGIMIFADKRFSRWDKRSKLPRWIQEHLQDSLCNLSTEEALQVVKRFL
RQMAQPFTREDQLGVSLLTAEQLQSDETKRKLESRVQLH
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgacgttgacggcctgtcggtgtttttcccctacgactacatctaccccgag
cagtattcctacatgctacaactcaagcagtgtctggacgcgaagggccatggggtgttg
gagatgccatcgggcacgggaaaaacggtcaccttgcttgcactcatccttgcttaccag
aaggcctttcctgccatggtatcaaagctgctgtactgctcgcggacaatgcccgagatt
gagaaggtggtggaggagctccgtcgtctgctcgagcactacaagcaagagactggggag
gagatgtctctgctgggcttgtgtctcacttctcgcaagaatctctgcatacacccacag
gttagtctggagcgtgacggccgggtagtggacggccggtgcttcagcttgacggcctcg
taccggcgggcgcaggccactgacccagccactcagtgctgttccttctttgagaacttc
gacgcccagggccgagacattcccctgcccactggcatctacagtgtggatgacctgaag
gagtatgggcgggtgcaccagctgtgtccttacttcgtggcacggcaagctgtgatgcac
gcgaaggtggtggtgtacagctaccactacctgctggaccccaagatcgccgaggtggtt
tccaaggagatgagccgcagcgctgttgtcatctttgatgaggcgcacaacatcgacaat
gtgtgcatcgagtccatgagtgtgcgcctgaacaagcggaccattgaagggagtatggag
aacattgacaaccttgagcataccatcaaggagttgaaggagcaggatgccgagaagctg
cgcacagagtatgagcagctgctggaaggacttcgcgaggcacgggaagcccgggaggct
gacctcatcctcgccaaccctgttcttcccgatgaggtgctgcaagaggcggttccgggc
aacattcgtctggcggagcactttgtggccttcctgcggcgcctgctggagtacgtcaag
atgcggctgcgggcacagcacatggtgcaggagagccccgccgccttcctcaaggacatc
ctgcagaaggtgtgcctggagcgcaagcccctgcgatttgcggcggagcgcttgcgatct
ctgctgcgaacccttgaagtgcctgacccgaccaacttcagccccctggtgcgcctctgc
cacttcgccagcctcgtgagcacctacaccaaggggtttacggtgattgtcgagccgtac
gacgagcggagtcccggtgtgccaaaccctgtgataaacctgtcttgcatggacgcctcg
ctgtccatcaagcctgtcttcaaccgttttcagtctgtcatcatcacgtcggggacgctg
tccccggtagagatgtacccaaagatccttgactttcggccagtcgtgtctgcttctctc
agcataaccttggcacgacccagcatatgccctctgattgtgagcaagggcagcgaccag
gtggccctgagcacgcgcttcgagacgcgtgatgaggtgtcagtggtgcgcaactatggg
gccctgctggtggagctggcatcgtgtgtgccggacggcatggtgtgcttcttcacttcg
tatgtgtaccttgagtcggtggtggctgcctggtacgagcagggggtcctcgaccagctg
cagcgccgcaagctgcttttcctcgagacgccggattcagctgagacggcgcttgcactg
gcaaactatgtcaaggcctgtgagaatggaagaggggccgtgctcctttctgtagctcga
ggcaaggtgtccgaaggtgttgactttgaccaccaccttggcagggctgtgctcatgttt
ggcatcccatttgtctacacacagagcaggatccttcgggcccggctggagtttctgcgg
gaccaattccagatccgggagaacgacttcctcacctttgatgccatgcggcacgctgcg
caatgtgtgggccgagcgcttcgcgggaagactgactacggcatcatgatctttgcggac
aagcgtttctcacggtgggacaagcgtagcaagctgcctcgctggatacaggagcacctg
caggactctctctgcaacctgagcacggaggaggcattgcaggtcgtcaagcgcttcctg
cggcagatggcacagccgttcacaagggaggaccagcttggagtgtctctactgacagct
gagcaactacagtccgatgaaactaagcgcaaactggagagcagggtgcagcttcactga
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