Dermacentor albipictus (winter tick): 139049076
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Entry
139049076 CDS
T11267
Symbol
DNAlig1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03030
DNA replication
dalb03410
Base excision repair
dalb03420
Nucleotide excision repair
dalb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139049076 (DNAlig1)
03410 Base excision repair
139049076 (DNAlig1)
03420 Nucleotide excision repair
139049076 (DNAlig1)
03430 Mismatch repair
139049076 (DNAlig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dalb03032
]
139049076 (DNAlig1)
03400 DNA repair and recombination proteins [BR:
dalb03400
]
139049076 (DNAlig1)
Enzymes [BR:
dalb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139049076 (DNAlig1)
6.5.1.6 DNA ligase (ATP or NAD+)
139049076 (DNAlig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
139049076 (DNAlig1)
DNA replication proteins [BR:
dalb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
139049076 (DNAlig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
139049076 (DNAlig1)
DNA repair and recombination proteins [BR:
dalb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
139049076 (DNAlig1)
NER (nucleotide excision repair)
Other NER factors
139049076 (DNAlig1)
MMR (mismatch excision repair)
Other MMR factors
139049076 (DNAlig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
139049076
NCBI-ProteinID:
XP_070380386
LinkDB
All DBs
Position
8:119255231..119293988
Genome browser
AA seq
904 aa
AA seq
DB search
MSQKKISSFFKTSAPASSSTKTENEAPAAASKSPEKDVDAEDVNGHASPVKAPSRRRIRM
ISDSDEETDQKEAAPEKDEEPVAPSSSKTPSPPPAKSEEPVQEPTIIKRRTARKTAKRSP
EPNRLSTESGTKRPKTEAASEEEPLPAQASSPQDNKKAKAEPAASPKQEEMETESTPEAD
EKVEPKKEKEEDEQLDKKKVTKASPPNKKELKDEKPSKKSKPSSPKDEKAKEKSPAVAGK
KLQNFAFTSSKSDQKSSAVTCDYDPSKANYDPVEDACWKKGAKVPYLALAITLDKIDGIS
GRLRIMEVLSNFLRSVLILSPDDLLSAVYLCLNKIAPDYQGLELGIGESLLVKALAEATG
RTPDKVRAEATAKGDLGLVAESSRSQQRVLFPPPPLMLSHVFTKLRAIAEMTGNSVQQKK
VDIIKVLLVACRQCEARFLVRSLGGKLRIGLAEASLLTALAHAAALSPPHGDPKASKKRL
EEAALLVKTAYCECPDYERLINALLEEGVDSLPKRCRLSPGIPLKPMLAHPTKAISEVLN
RFEGSAFTCEFKYDGERAQIHLLEDGSVRIYSRNQEDNTGKYPEVVSRIRAAISPDTKTC
ILDSEAVAWDRPSQTILPFQTLSTRKRKETTEEEVKVQVCVFAFDLLYLNGESLVKETLR
KRRELLRKILIEVPGETQLARSADLSTVEDIQEFLQESIKGSCEGLMVKSLDTGASYEIA
KRSHNWLKLKKDYLDGVGDSVDAVVLGGYHGKGKRTGTFGCFLLGCYDPDNEEFQTLCKI
GTGFSEEQLDQHSAFFKEHVIPAPKSYYRFDSSLAPDAWFEPCQVWEIKSADLSVSPVHK
AALGLVDPEKGISLRFPRFIRIRDDKNPEDATSAQQVADLYNKQDHIKNKKAAVQETAAD
EDFY
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaagaagatatcatcgttcttcaagacctccgcgccggcttcatcgagcacg
aagaccgagaacgaggcccccgcggccgcctcgaagtcgcccgagaaagacgtcgacgca
gaagacgtcaacgggcatgcctcccctgtgaaggcgccctcgcggaggcgcattcggatg
atcagcgacagcgacgaggaaacagatcagaaggaagcggcgccagagaaggatgaggag
ccagttgctccgtctagcagcaagacgccgtccccgccgcctgccaagtcagaggaaccc
gtccaagagccgaccatcatcaaacgaagaacagctcgcaagaccgccaagcgcagtccc
gagcccaaccggctgtcaacagagtccggcaccaaaagaccgaagactgaggcagcttcg
gaggaagagccattacctgcacaggcttcttctccacaggacaacaagaaagccaaggcg
gagccagctgcatcgcctaaacaggaggagatggagaccgagtctacacctgaagcagat
gaaaaagtggagccgaaaaaagaaaaagaagaggacgaacaactggacaaaaagaaagta
acaaaagcctcgccaccaaataaaaaagaactcaaggacgagaagccatctaagaagtcc
aagccctcgtctccgaaggacgagaaggccaaagaaaagtcgccggccgtagccgggaag
aagctccaaaactttgccttcacatcttcaaagtcagaccagaaatcgtctgctgtgaca
tgtgactacgaccctagcaaggccaactacgaccccgtggaagacgcctgctggaagaaa
ggtgccaaggtgccataccttgctcttgccatcaccttggacaagattgacggcatctcg
ggcaggcttcgcattatggaagttttgagcaacttcctccgctcggtgctgatcctgtca
cccgacgacctgctgagtgctgtctacctgtgcctcaacaagatcgcacccgactaccaa
ggtcttgagttgggcattggcgaatcgctgctggtcaaggcactggccgaggccactggg
cgtactccggacaaagtgcgggccgaagccacagccaagggcgaccttggccttgtcgca
gagagcagccgcagccaacaacgggtgctgttcccaccgccgccgctgatgctgtcgcac
gtctttaccaagttgcgtgcaattgcagagatgaccggaaactcggtgcagcagaagaaa
gtcgacataatcaaggtcctgctcgtcgcctgccgtcagtgcgaggcccggtttcttgta
cgctcgctcgggggcaaactgcgcattggcctggccgaggcgtcgctgctgaccgccctg
gctcatgcggctgcgctctcgccacctcatggggaccccaaggcatccaagaagcggctt
gaggaagcggccttgcttgtcaagactgcttactgtgagtgtccagactatgaacgactg
atcaacgccctgctggaagaaggcgtcgactcgcttcccaagcgctgccgcctgagtccc
ggcatccctctgaagccaatgctcgcccatcccaccaaggccatctcagaggtgctcaac
cgcttcgaggggtcagccttcacgtgcgagttcaagtacgacggcgagcgagctcagatc
cacctcttggaagacggcagtgtgcgcatctacagccggaaccaggaggacaacacgggc
aaatacccagaggtcgtgtcgcgcatccgagcagcgatctcgcccgacacaaagacctgc
atcttggacagtgaggcggttgcttgggaccgtcccagccagaccatcctgccgttccag
accctgagtactcgcaaacggaaggagacaacagaagaggaggtcaaggttcaagtctgc
gttttcgctttcgaccttctgtacctgaacggcgagtccctggtcaaggagaccctgcgg
aagcgccgggagctccttcgcaagatcctcattgaagtacccggcgagactcagctggcg
cgctcggccgacctgtcgacggttgaagacattcaggagttcctgcaggagtccatcaaa
ggcagctgcgaaggtctgatggtcaagtctttggacactggggcttcgtacgaaattgca
aagcggtcccacaactggctcaagttgaagaaggactacctagatggcgttggtgacagc
gtggacgctgtggtccttggtggctaccatggcaaggggaagcgtacgggcacgtttggc
tgcttcctgctcggctgctacgaccctgataacgaggagttccaaacgctctgcaagatt
ggcactggttttagtgaagagcagctggaccagcactccgccttcttcaaggagcacgtc
atcccggcgcccaagtcatactaccggtttgacagcagcctcgcacctgatgcctggttc
gagccctgtcaggtgtgggagatcaagagtgccgacctctcagtctcacccgttcacaag
gcggcccttggactggttgatcctgagaagggcatttccctgcggtttccccggttcatc
aggatacgagatgacaagaacccagaggatgccacttctgcccagcaggttgcagacttg
tacaacaagcaagaccacatcaagaacaaaaaggcagccgtccaagaaaccgcagccgac
gaagatttttattaa
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