Dermacentor albipictus (winter tick): 139050898
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Entry
139050898 CDS
T11267
Symbol
Patr-1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dalb Dermacentor albipictus (winter tick)
Pathway
dalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139050898 (Patr-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dalb03019
]
139050898 (Patr-1)
Messenger RNA biogenesis [BR:
dalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139050898 (Patr-1)
mRNA degradation factors
5'-3' decay
Decapping complex
139050898 (Patr-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
DUF6604
Motif
Other DBs
NCBI-GeneID:
139050898
NCBI-ProteinID:
XP_070383817
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Position
10
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AA seq
840 aa
AA seq
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MSKGFLAFRKESQGLQPLSHEEELLTAEVEDDYDALNDETFGGGLDDGWEEVHEKFAELE
DRARHPLDSSSVVDSLVDEDPLSLNQDVVEQSISHLGLEDDRDDDPAIKSYSKSTTSPWP
IEGGRTCSSPPPPAILQQFGGSPKTDTIWTPKAVYPPADDRLASLLWKLQQQSSAQALSQ
AVPGKSSLPPNVHMLEELERDMLYSGGSYPMPIGSPRCGSPWAAVHPEHEAGSPCSGVAS
SPGKRGSAEHSTGVLPAFSAQPKAAQFRFNQSRPPYPPPSVQAGVVPLPAQLGMSPPART
PGLVHGRMSPGIHSTSFGSHLPIPPVPHPMLGRGRVMVGPPPSMLLNSTIQSQMPLPGNL
PFRPGFSTMDLRRLLYPRQVQHPLLNKNHFASSASNAHYQQHAYQTVFGQGSLPYDNPRQ
PAHHSYLRPQLHGNLDHRDNSNSFSGEQSDDPYAGLMTQKEKDWLVKIQLLQVQPENPDV
DDYYYVMFTKKKAQQQELPGVDGGDDDKLKFIRPERVRTESKSYTPIQFERSLGKLQVVS
VNYPRKILDMGVQRLSEDEDRKVPPDRHLLWFRQLLLDIEKLYSAVLEFEDNNCSAERQA
EIAEKLFNEVQPSEERFVQMVGVRKGRSLVLRVLPKLKAEHQVATLAALLRHLSWLQRKD
RHDGILERGLLSAIAVIEHATLNDLIQLAASLLMNPDAAFPSTFALRVAWAIVVRAEYHF
QCEEASQPFLNEVHKKWAKLLSEMVDLLIASLKKHDIGEDDTSVKSKYNSAVLLLFPHER
RALASQLRRFAINSQLASELSCTYPVKPTHQAVLQLHHQQNGFGDKAALPCCGEPVTAVD
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggatttttggctttccgcaaggagtcccaggggttgcaaccactgagtcac
gaggaggagcttctcacggctgaagtcgaggatgactacgatgccctcaacgatgagact
tttggagggggtctcgatgacggctgggaagaggtgcacgagaagtttgctgaacttgaa
gatcgtgccagacacccattggactcctcctccgtggtggattcactggttgatgaagat
cctctttcattaaaccaggatgtggtagagcaaagcatctcccaccttggtttggaagat
gacagggatgatgacccagctatcaagtcttactccaagtctacaacatcaccgtggccc
attgaaggggggcgcacctgttcttcaccaccaccgccggcgattctccaacagtttggc
ggttccccaaagacagatacaatctggacaccaaaggcggtatatccacccgctgatgac
agacttgcttccctcctctggaaactacagcagcaaagctctgcacaagctttatcccag
gctgttcctgggaaatcgtctttgccccccaatgtgcacatgttggaagagctggaacgg
gatatgctgtattctggtggcagctatcccatgcccattgggagccctcgttgtgggtcg
ccctgggctgcggttcatcctgaacatgaggcagggtcaccatgctctggtgtggccagt
tcacctggtaaacggggatcagcagaacacagcactggagtgctgcctgctttcagcgcc
cagccaaaagcggcacagtttcgtttcaaccagagccgaccaccgtacccgcctcctagt
gtgcaagctggtgttgttcccttgcctgcccagcttggtatgtcaccccctgccaggaca
ccaggacttgtccatggccgcatgtcgccaggaattcattcaactagctttggaagccac
ctgccaattcctcctgtgccccatcccatgctaggacgggggagggtcatggtgggccct
cctccatccatgttgctcaacagcacaatccaaagccagatgccactgccaggcaacctg
cctttcagacccggattcagcactatggaccttcgacgcctcctctaccctcggcaggtt
caacacccacttctgaataagaaccactttgcatcatcggccagcaatgcacactaccag
caacatgcataccagaccgtatttggccagggcagcttgccatatgacaaccctcggcag
ccagcccatcactcatatctacggccacagctgcatggcaatttggatcaccgggacaat
agcaactcattctctggcgagcagtcagatgacccttatgcagggctcatgacacagaag
gaaaaggattggttggtcaagatccagctgctccaagtgcagccagaaaacccagatgta
gatgattactactatgtgatgttcaccaaaaagaaggctcaacaacaagaactgccaggt
gtggatgggggcgacgatgacaaactaaaattcattcgaccagagcgagtgcgcacagaa
tcaaaaagctacacaccaatccaatttgagcggtcactgggaaagttacaagtggtgagc
gtcaactacccacggaaaatccttgacatgggtgtccaacggctctctgaagatgaagac
cgcaaggtccctccagatcgtcacttgttgtggttccgccaacttctgcttgacatagaa
aagctctactctgcagttctggagtttgaggataacaactgttctgcagagcgtcaagca
gagatagcagagaagttgtttaatgaggtgcagccctcagaagagcgcttcgtccaaatg
gtgggtgtgcggaaaggccgctccttggtgcttcgtgtgcttcccaagctgaaagctgag
caccaggtagcaacattggcagccctgctgcgccacttatcatggttgcagcgcaaggac
aggcatgatggcatactggaacgagggctgctcagtgccatcgcagtcattgagcacgct
acccttaatgacctcatccaactggcagccagcttgctcatgaatccggatgctgcattt
ccaagcacatttgctctccgtgtggcctgggctattgtagtgcgagcggaataccatttt
cagtgtgaagaagctagccagccattcttgaatgaagtgcacaagaaatgggcaaagctg
ctttctgaaatggtggatttgctcatcgcctcactcaagaagcatgacattggcgaagac
gacacaagcgtcaaaagtaaatataactctgcggtacttctgctgtttccacatgagcgt
cgagcccttgcgtcacagctgcgacgctttgcaataaactctcagcttgctagtgaactg
tcctgcacttatcctgtaaagcccacgcaccaggctgtgcttcagttgcatcatcagcag
aatggatttggcgacaaagctgcattgccctgctgtggtgaacctgtaacagctgttgac
taa
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