KEGG   Dermacentor albipictus (winter tick): 139053001
Entry
139053001         CDS       T11267                                 
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
  KO
K15542  polyadenylation factor subunit 2
Organism
dalb  Dermacentor albipictus (winter tick)
Pathway
dalb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dalb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    139053001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dalb03019]
    139053001
Messenger RNA biogenesis [BR:dalb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     139053001
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR55 Beta-prop_IFT140_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_RFWD3 eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_WDR11_2nd PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_RIG_1st PROPPIN
Other DBs
NCBI-GeneID: 139053001
NCBI-ProteinID: XP_070386235
LinkDB
Position
Unknown
AA seq 830 aa
MPVVTMQVIQTQPMTPGGRFQYGGGPKYGGYGGGRSQAGGTYGPVGGRPGMSSMQSIEFD
GKRLRKAVARKTVDYNTAVVEYLENRVWQRDYRDARALQPDSGYYTRLMPPLAMLSNPIN
AVTTKFVRTSTNKMRCPIFCVVWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSSV
RCMVWSHNDTWMVTGDHSGYVKYWQSNMNNVKMFQGHKEAIRGISFCPTDTKFTTCSDDG
TVRVWDFLRCFEEKILRGHGADVKCVDWHPQKSLIVSGSKDSQQPIKLWDPKSGQSLATL
HAHKSTVMEVKWNRNGNWLLTASRDHLLKLFDIRKMNQEMQTFRGHKKEACSLAWHPIHE
CLFASGGSDGAVMFWMVGADKEVGAMENAHDSCVWSLAWHPLGHILCSGSNDHTSKFWTR
NRPGDKMRDKYNLNTLPRGLDDTGEYDEPTTTPASATPNIPGMGLEQSTLEAVRALSDVQ
TQAMPSAGGGGRKDFGGGGGRELGGSIPGLDFGEEVHESHSGGGGGGRHKRTPFSKPIPK
HFQQQWMENKQPLLLAPPPTDGAGVPSPSLAQQQQEGGADGSQLQQPTVPGMTPAGMNLQ
QPPQQQQPGMPMGMMGQPQGGMGGFTPVGGLLGAPPHPSSMMFPHFQGAPPVSATGVDAP
PNGVPMGFRHQGLPPIAGQDQGQFQRQAAGEWRNMGDPGSGSQAQPQIRQQFQQQQQQDG
SAGVPDTGTFFQPQQQQQQFWRGGGSPHKRGGGGSHWYQGDGPGQQQEGLKRPWGADEGG
SEGQPPSKRGGGWGARGGGGFGRGFGRGGFRGRGGFRGGRSGPRGGVRGH
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgccagtggtgaccatgcaggtaatccagacgcagccaatgactcctggtggccgcttc
cagtatggaggtggccccaaatatgggggctacggagggggacgcagccaggcaggagga
acctatgggcctgttggaggcagaccaggcatgtcctccatgcagagtatcgagtttgat
gggaaacgcctgcgcaaggccgttgcccgcaagactgttgactacaacactgctgtggtt
gagtacctcgagaatcgtgtctggcagagggactatcgggacgcaagagccctgcagccg
gattcgggttactacaccaggttgatgccccccctggccatgctgtccaaccccatcaat
gctgtgaccaccaagtttgtgcgcacctccaccaacaagatgcgctgtcccatcttctgc
gtagtgtggactcccgagggtcggcggctcatcacgggggcatcaagcggggagttcacc
ctctggaacggactcacattcaactttgagaccattctgcaggcacatgactcgtcagtg
cgctgcatggtgtggagccacaatgacacgtggatggtgactggggaccattcgggctac
gtcaagtactggcagtccaacatgaacaatgtcaagatgttccagggccacaaggaggcc
attcgaggcatcagcttctgcccgacggacacaaaattcaccacttgttccgatgacgga
acggtgcgcgtctgggacttcctgcgctgctttgaggagaagatcctccgagggcatggg
gcagacgtaaagtgcgtggactggcacccgcagaagtcgctcattgtgtccggcagcaag
gacagccagcagcccataaaactgtgggaccccaagtctgggcagagcctggcaaccctc
cacgcacacaagagcacagtgatggaggtgaaatggaaccgcaatggcaactggctgctg
acagcttcccgggaccacctgctcaagctgtttgatattcgcaagatgaaccaggagatg
cagaccttccgtggacacaagaaggaggcctgcagcttggcatggcacccaatccacgag
tgcctgtttgccagtggcggttctgacggtgccgtcatgttctggatggttggggctgac
aaggaagtgggtgctatggagaatgctcacgactcgtgcgtctggtctctggcctggcac
ccattgggacacatcctctgctctgggtccaacgaccacacaagcaagttctggacacgc
aatcgaccgggggacaaaatgcgggacaagtacaacctcaacactctacccagagggctg
gatgacactggagaatatgatgagccgacgactacaccagcatcggccacgcctaacata
cctggcatgggactggagcagagcaccctggaggctgtgcgagctctgagcgatgtgcag
actcaagccatgcccagtgctggaggcggtggccggaaggactttggtggcggtggtggc
cgggaactgggtggctccattccgggcctggactttggcgaagaggtgcacgagagccac
tcgggtggtggtgggggtggccgacacaagcgcaccccgttttccaagcccattccgaag
cacttccagcagcagtggatggagaacaaacagcccctgctgctggcacctccacccacg
gatggggcaggggtgccctctccgagcctcgcccagcagcagcaagagggtggtgcggat
ggttcccagttgcaacagcccacagtgccaggcatgacacccgctggcatgaacctgcag
cagccaccacagcagcagcagccaggcatgcccatgggcatgatgggccagccacagggg
ggcatgggaggctttacacctgtcgggggcctcctcggcgcaccgccgcatccgagcagc
atgatgtttccccactttcagggggcaccgccggtctctgctacaggtgtcgatgcacca
cccaacggcgtgcccatgggctttcgacaccagggattgccacccatagccggccaggac
cagggccagttccagagacaggcggctggcgagtggcgcaacatgggcgaccctggctca
ggcagccaggcacaaccacagatcaggcaacagttccaacaacagcagcagcaagacggc
agtgctggggttccagacaccggcactttcttccagccacaacagcaacagcagcagttc
tggcgaggcgggggcagcccgcacaagcgcggcgggggcggcagccattggtaccaaggg
gatggacctgggcaacagcaggagggactcaagcggccctggggggctgacgagggggga
tccgagggacagccaccaagcaagaggggcggaggatggggcgccaggggtggcggcggc
ttcgggcgcggcttcggcaggggaggcttccgtggtcgagggggtttccgtggcggcagg
agcggtccaaggggaggagtgaggggccactga

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