Dermacentor albipictus (winter tick): 139054108
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Entry
139054108 CDS
T11267
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
dalb Dermacentor albipictus (winter tick)
Brite
KEGG Orthology (KO) [BR:
dalb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dalb03041
]
139054108 (Caper)
Spliceosome [BR:
dalb03041
]
Common components
Common spliceosomal components
General mRNP proteins
139054108 (Caper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
RRM_PARP14_3
RRM_10
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
139054108
NCBI-ProteinID:
XP_070386753
LinkDB
All DBs
Position
1:complement(187885883..187970461)
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AA seq
575 aa
AA seq
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MKVIDLLSGALKVEVISASSANASAFLARRWCRRRRGIMADDLDVEALLEAPYRKTPHTR
HQHFFPSYHWDTARRAELNGGAASWLQSEEVNGAGSLHQASSSGEGAKGSADKENRHGSS
SSKKRRSRSRSRSRGHGRHRSRSRGREKRRSRSRSRERRRRRSRSPGRRRGPPLPPRPRS
RSRSRDRRRRRSISPRRRGLDDITPEERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDV
RLIMDNKTRRSKGIAYVEFQDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNAST
SSSTLQRGNVGPMRLYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFIT
FHDSEDAKKALEQLNGFELAGRPMKVGHVTERTDVSQAPSFLDSEELDRSGIDLGATGRL
QLMAKLAEVLSIARTGFQIPQAAVNALQMNPTVLPGQPQAAAVAAAAAPTIATQCFLLSN
MFDPLTETNPSWDEEIRRDVIEECRKHGGVLHVYVDRASPEGHVYVKCPTIASAVASVNA
LHGRWFAGRIITAAYVPVMSYHTLFPDSATTNTLL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattgacttgctatcaggtgcacttaaagttgaggtcatcagcgcttcttca
gccaatgcttcagctttcctcgctcgtcgttggtgtcgtcgtcgtcgaggtatcatggca
gatgaccttgacgtggaggccttgctggaggcaccttatcgaaagaccccccacactaga
caccagcacttcttccctagctaccattgggacactgcaagaagggctgagctgaatggt
ggcgctgcaagttggttacagtcggaggaggtgaatggtgcaggaagccttcatcaagca
agttcatctggagaaggcgctaagggctcagctgacaaggagaacaggcatggcagcagc
agcagcaagaaaaggcgcagtcggagccgcagccggagccgaggtcatggacgtcacagg
agccgaagccgtggcagggagaagcgccgttcccggtcccggtcccgagagcgaagaagg
cggcgttcgcgcagtcctggacgtcgacgaggaccacccctgcctccccggccacggagc
cggagtcgcagccgagacaggcggagacggcgttctatttcacccaggcgaaggggcttg
gatgacatcacacctgaggagcgagacatgcggacggtcttctgcatgcagctttctcaa
cgcattcgtgcacgggacttggaggagtttttttcagctgtaggcaaggttcgagatgta
cggctgatcatggacaacaagacacggaggtccaagggcattgcatatgttgaatttcaa
gatgtagagtctgtaccattggccatgggattgaatgggcagaagttgtttggcatcccc
atagtggtccagccaacacaagcagagaggaaccgggctgctgcacaaaatgccagcaca
agcagcagcactttgcaacgaggaaatgttgggccaatgcgcctttatgttggctcattg
catttcaacatcactgaagacatgctcaagggcatctttgaaccatttggcaaaattgac
aagatagagctcatcaaggatatggagaccaaccgctccaagggctatggtttcataaca
ttccatgactcggaagatgcaaaaaaggctttggagcagttgaatggctttgaactggca
ggccgacccatgaaagtgggtcatgtgacagagcgcactgatgtgtctcaggcacccagc
ttcttggacagtgaggagctggaccgaagtggcattgaccttggtgctactggacgtctg
cagctgatggcgaaactagcagaagttttatcgatagcacgcacagggttccagatacca
caagctgcagttaatgcccttcaaatgaaccccactgtactgccaggacagccccaagca
gctgctgtggcagcagcagctgcaccaacaatagccacccagtgtttcctgctgtccaac
atgtttgaccctttgacggaaacaaatccttcttgggatgaggagattcgacgagatgtg
attgaagagtgccgcaagcatggtggagttctgcatgtctacgtagatcgggcatcacct
gagggacatgtgtacgtcaagtgcccaaccattgcctcagcagtagcctctgtcaatgcg
ctgcatgggcgctggtttgctggtcgaatcattacagctgcgtatgtcccagtcatgagt
taccacaccctcttcccggactctgcaacgacaaataccctgttgtga
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